GRMZM2G401835 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G401835 T272164_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.695 0.723
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00 		Ostreococcus tauri
NNNDATCN
NGATHNNN		 PBM
Weirauch et al.(2014)
pTH9644 		0.687 0.702
ARR14
M00873_2.00 		Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN		 PBM
Franco-Zorrilla et al.(2014)
ARR14 		0.665 0.681
ARR14
M02293_2.00 		Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN		 PBM
Weirauch et al.(2014)
pTH7531 		0.665 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G401835_P01 Myb 122 172

Links

Other Myb/SANT family TFs
Other Zea mays TFs

254 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb05g004150 Sorghum bicolor Sb05g004150 I 0.827
GRMZM2G360523 Zea mays GRMZM2G360523 I 0.809
BRADI3G06120 Brachypodium distachyon BRADI3G06120 I 0.806
F775_13501 Aegilops tauschii F775_13501 I 0.806
GRMZM2G060485 Zea mays GRMZM2G060485 I 0.806
MLOC_3955 Hordeum vulgare MLOC_3955 I 0.806
MTR_3g106220 Medicago truncatula MTR_3g106220 I 0.806
Sb04g005580 Sorghum bicolor Sb04g005580 I 0.806
Si016630m.g Setaria italica Si016630m.g I 0.806
Traes_6AS_A42E71A00 Triticum aestivum Traes_6AS_A42E71A00 I 0.806
Traes_6BS_B50BEBC7E Triticum aestivum Traes_6BS_B50BEBC7E I 0.806
Traes_6DS_EF4A57213 Triticum aestivum Traes_6DS_EF4A57213 I 0.806
TRIUR3_31924 Triticum urartu TRIUR3_31924 I 0.806
Pavir.Aa03151 Panicum virgatum Pavir.Aa03151 I 0.806
Pavir.Ab00568 Panicum virgatum Pavir.Ab00568 I 0.806
RR24 Oryza indica BGIOSGA007015 I 0.791
LPERR02G05460 Leersia perrieri LPERR02G05460 I 0.791
OB02G15530 Oryza brachyantha OB02G15530 I 0.791
OBART02G06200 Oryza barthii OBART02G06200 I 0.791
OGLUM02G06200 Oryza glumaepatula OGLUM02G06200 I 0.791
OLONG_007266 Oryza longistaminata OLONG_007266 I 0.791
OMERI02G07120 Oryza meridionalis OMERI02G07120 I 0.791
ONIVA02G07230 Oryza nivara ONIVA02G07230 I 0.791
ORGLA02G0057500 Oryza glaberrima ORGLA02G0057500 I 0.791
ORUFI02G06340 Oryza rufipogon ORUFI02G06340 I 0.791
RR24 Oryza sativa OS02G0182100 I 0.791
RR23 Oryza indica BGIOSGA005436 I 0.790
RR22 Oryza indica BGIOSGA022430 I 0.790
F775_14758 Aegilops tauschii F775_14758 I 0.790
F775_19079 Aegilops tauschii F775_19079 I 0.790
GRMZM2G409974 Zea mays GRMZM2G409974 I 0.790
GRMZM2G479110 Zea mays GRMZM2G479110 I 0.790
LPERR06G04900 Leersia perrieri LPERR06G04900 I 0.790
MLOC_11341 Hordeum vulgare MLOC_11341 I 0.790
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.790
OB02G42700 Oryza brachyantha OB02G42700 I 0.790
OB06G14930 Oryza brachyantha OB06G14930 I 0.790
OBART06G05360 Oryza barthii OBART06G05360 I 0.790
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I 0.790
OMERI06G06380 Oryza meridionalis OMERI06G06380 I 0.790
ONIVA06G06160 Oryza nivara ONIVA06G06160 I 0.790
OPUNC06G05150 Oryza punctata OPUNC06G05150 I 0.790
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I 0.790
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I 0.790
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I 0.790
RR23 Oryza sativa OS02G0796500 I 0.790
RR22 Oryza sativa OS06G0183100 I 0.790
Sb04g035980 Sorghum bicolor Sb04g035980 I 0.790
Sb10g005580 Sorghum bicolor Sb10g005580 I 0.790
Si006013m.g Setaria italica Si006013m.g I 0.790
Si016546m.g Setaria italica Si016546m.g I 0.790
TCM_036926 Theobroma cacao TCM_036926 I 0.790
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I 0.790
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I 0.790
Traes_7DS_327FBC2CA Triticum aestivum Traes_7DS_327FBC2CA I 0.790
TRIUR3_26858 Triticum urartu TRIUR3_26858 I 0.790
TRIUR3_28229 Triticum urartu TRIUR3_28229 I 0.790
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I 0.790
Pavir.J08270 Panicum virgatum Pavir.J08270 I 0.790
Pavir.J35630 Panicum virgatum Pavir.J35630 I 0.790
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I 0.783
GLYMA04G06650 Glycine max GLYMA04G06650 I 0.782
GLYMA06G06730 Glycine max GLYMA06G06730 I 0.782
GLYMA14G13320 Glycine max GLYMA14G13320 I 0.782
PRUPE_ppa024819mg Prunus persica PRUPE_ppa024819mg I 0.782
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I 0.782
Cla021325 Citrullus lanatus Cla021325 I 0.782
Pm005710 Prunus mume Pm005710 I 0.782
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I 0.782
Cucsa.271670 Cucumis sativus Cucsa.271670 I 0.782
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I 0.782
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I 0.782
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I 0.782
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I 0.782
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I 0.782
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I 0.782
PGSC0003DMG400003196 Solanum tuberosum PGSC0003DMG400003196 I 0.778
Solyc07g005140.2 Solanum lycopersicum Solyc07g005140.2 I 0.778
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.778
mgf001591m Mimulus guttatus mgf001591m I 0.778
mgf014863m Mimulus guttatus mgf014863m I 0.778
Si007844m.g Setaria italica Si007844m.g I 0.777
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I 0.767
Pavir.Db00757 Panicum virgatum Pavir.Db00757 N 0.766
Pavir.J10177 Panicum virgatum Pavir.J10177 N 0.766
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I 0.764
Traes_7AS_503B57D77 Triticum aestivum Traes_7AS_503B57D77 I 0.762
CM1729.100.nc Lotus japonicus CM1729.100.nc I 0.752
Sb08g006300 Sorghum bicolor Sb08g006300 N 0.744
GSMUA_AchrUn_randomG18820_001 Musa acuminata GSMUA_AchrUn_randomG18820_001 I 0.737
OLONG_005451 Oryza longistaminata OLONG_005451 I 0.737
Traes_7AS_1318B59D3 Triticum aestivum Traes_7AS_1318B59D3 I 0.737
Traes_7BS_17C8D2707 Triticum aestivum Traes_7BS_17C8D2707 I 0.737
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.734
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.734
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.734
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.734
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.734
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.734
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.734
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.734
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.734
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.734
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.734
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.734
TCM_021300 Theobroma cacao TCM_021300 I 0.734
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.734
Ca_02989 Cicer arietinum Ca_02989 I 0.734
Cla009424 Citrullus lanatus Cla009424 I 0.734
Cla022101 Citrullus lanatus Cla022101 I 0.734
29889.m003245 Ricinus communis 29889.m003245 I 0.734
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.734
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.734
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.734
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.734
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.734
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.734
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.734
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.734
MDP0000224740 Malus domestica MDP0000224740 I 0.734
MDP0000290818 Malus domestica MDP0000290818 I 0.734
PK26059.1 Cannabis sativa PK26059.1 I 0.734
Pavir.Db00644 Panicum virgatum Pavir.Db00644 I 0.733
BRADI1G47400 Brachypodium distachyon BRADI1G47400 I 0.730
BRADI3G54120 Brachypodium distachyon BRADI3G54120 I 0.730
MLOC_76165 Hordeum vulgare MLOC_76165 I 0.730
Traes_6BL_790C095EE Triticum aestivum Traes_6BL_790C095EE I 0.730
Traes_6DL_D1C9CE275 Triticum aestivum Traes_6DL_D1C9CE275 I 0.730
GSMUA_Achr3G13400_001 Musa acuminata GSMUA_Achr3G13400_001 I 0.729
evm.TU.supercontig_127.10 Carica papaya evm.TU.supercontig_127.10 I 0.729
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.728
Eucgr.C04050 Eucalyptus grandis Eucgr.C04050 I 0.728
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.727
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.727
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.727
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.727
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.727
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.727
TCM_011067 Theobroma cacao TCM_011067 I 0.727
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.727
27647.m000179 Ricinus communis 27647.m000179 I 0.727
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.727
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.727
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.727
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.727
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.727
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.727
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.727
mgf010113m Mimulus guttatus mgf010113m I 0.725
mgf012203m Mimulus guttatus mgf012203m I 0.725
Cagra.2235s0034 Capsella grandiflora Cagra.2235s0034 I 0.725
Carubv10018465m.g Capsella rubella Carubv10018465m.g I 0.725
GLYMA17G33230 Glycine max GLYMA17G33230 I 0.722
SapurV1A.0705s0030 Salix purpurea SapurV1A.0705s0030 I 0.722
PK02601.1 Cannabis sativa PK02601.1 I 0.722
Gorai.006G259700 Gossypium raimondii Gorai.006G259700 I 0.719
gene15029-v1.0-hybrid Fragaria vesca gene15029-v1.0-hybrid I 0.715
gene05178-v1.0-hybrid Fragaria vesca gene05178-v1.0-hybrid I 0.714
chr5.LjT32I14.90.nd Lotus japonicus chr5.LjT32I14.90.nd I 0.710
Traes_6AL_9C9D677D4 Triticum aestivum Traes_6AL_9C9D677D4 I 0.708
PDK_20s13009423g003 Phoenix dactylifera PDK_20s13009423g003 I 0.708
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.704
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.704
TCM_037098 Theobroma cacao TCM_037098 I 0.704
29737.m001227 Ricinus communis 29737.m001227 I 0.704
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.704
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.701
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.697
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.697
SELMODRAFT_187683 Selaginella moellendorffii SELMODRAFT_187683 I 0.695
SELMODRAFT_418787 Selaginella moellendorffii SELMODRAFT_418787 I 0.695
e_gw1.362.4.1 Physcomitrella patens e_gw1.362.4.1 D 0.695
SapurV1A.0739s0030 Salix purpurea SapurV1A.0739s0030 I 0.694
29848.m004559 Ricinus communis 29848.m004559 I 0.692
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.692
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.692
MTR_3g102590 Medicago truncatula MTR_3g102590 I 0.691
Sb10g024180 Sorghum bicolor Sb10g024180 N 0.691
Cucsa.069440 Cucumis sativus Cucsa.069440 I 0.688
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.688
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.688
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.688
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.688
OSTLU_5500 Ostreococcus lucimarinus OSTLU_5500 I 0.687
e_gw1.1.649.1 Ostreococcus RCC809 e_gw1.1.649.1 I 0.687
EuGene.0000130210 Micromonas pusilla EuGene.0000130210 I 0.687
estExt_fgenesh2_pg.C_Chr_100175 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_100175 I 0.687
estExt_fgenesh1_pg.C_Chr_16.00010090 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_16.00010090 D 0.687
Bo2g028820 Brassica oleracea Bo2g028820 I 0.686
Bra020390 Brassica rapa Bra020390 I 0.686
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.686
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.686
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.686
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.686
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.686
GLYMA09G04470 Glycine max GLYMA09G04470 I 0.685
CHLREDRAFT_111844 Chlamydomonas reinhardtii CHLREDRAFT_111844 I 0.683
gw1.37.160.1 Volvox carteri gw1.37.160.1 I 0.683
AMTR_s00019p00208460 Amborella trichopoda AMTR_s00019p00208460 I 0.682
SELMODRAFT_447635 Selaginella moellendorffii SELMODRAFT_447635 I 0.682
Si008512m.g Setaria italica Si008512m.g N 0.681
cassava40494.m1 Manihot esculenta cassava40494.m1 I 0.681
gene10041-v1.0-hybrid Fragaria vesca gene10041-v1.0-hybrid I 0.681
PDK_20s1451831g001 Phoenix dactylifera PDK_20s1451831g001 I 0.681
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.679
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.679
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.679
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.679
F775_26936 Aegilops tauschii F775_26936 I 0.677
TRIUR3_24314 Triticum urartu TRIUR3_24314 I 0.677
e_gw1.83.144.1 Volvox carteri e_gw1.83.144.1 I 0.676
Bo1g010830 Brassica oleracea Bo1g010830 I 0.675
Ciclev10004989m.g Citrus clementina Ciclev10004989m.g I 0.674
Solyc12g099380.1 Solanum lycopersicum Solyc12g099380.1 N 0.671
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.670
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.670
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.670
Pm027701 Prunus mume Pm027701 I 0.670
e_gw1.1.548.1 Coccomyxa subellipsoidea C169 e_gw1.1.548.1 I 0.668
RR21 Oryza indica BGIOSGA012149 I 0.667
BRADI1G69480 Brachypodium distachyon BRADI1G69480 I 0.667
F775_32153 Aegilops tauschii F775_32153 I 0.667
GRMZM2G099797 Zea mays GRMZM2G099797 I 0.667
GRMZM2G126834 Zea mays GRMZM2G126834 I 0.667
LPERR03G08040 Leersia perrieri LPERR03G08040 I 0.667
OB03G19140 Oryza brachyantha OB03G19140 I 0.667
OBART03G08950 Oryza barthii OBART03G08950 I 0.667
OGLUM03G09080 Oryza glumaepatula OGLUM03G09080 I 0.667
OLONG_002370 Oryza longistaminata OLONG_002370 I 0.667
OMERI03G08390 Oryza meridionalis OMERI03G08390 I 0.667
ONIVA06G01160 Oryza nivara ONIVA06G01160 I 0.667
OPUNC03G08640 Oryza punctata OPUNC03G08640 I 0.667
ORGLA03G0086800 Oryza glaberrima ORGLA03G0086800 I 0.667
ORUFI03G09090 Oryza rufipogon ORUFI03G09090 I 0.667
RR21 Oryza sativa OS03G0224200 I 0.667
POPTR_0008s13490 Populus trichocarpa POPTR_0008s13490 I 0.667
Sb01g042400 Sorghum bicolor Sb01g042400 I 0.667
Si034517m.g Setaria italica Si034517m.g I 0.667
Traes_4AS_6486B493A Triticum aestivum Traes_4AS_6486B493A I 0.667
Traes_4BL_941E7DE4D Triticum aestivum Traes_4BL_941E7DE4D I 0.667
Traes_4DL_2527CA8BF Triticum aestivum Traes_4DL_2527CA8BF I 0.667
TRIUR3_25342 Triticum urartu TRIUR3_25342 I 0.667
Pavir.Ia04946 Panicum virgatum Pavir.Ia04946 I 0.667
Pavir.Ib00921 Panicum virgatum Pavir.Ib00921 I 0.667
SapurV1A.0015s0530 Salix purpurea SapurV1A.0015s0530 I 0.667
ARR14 Arabidopsis thaliana AT2G01760 D 0.665
Bra036015 Brassica rapa Bra036015 I 0.665
ARR14 Arabidopsis lyrata scaffold_500093.1 I 0.665
CHLREDRAFT_113139 Chlamydomonas reinhardtii CHLREDRAFT_113139 I 0.662
e_gw1.10.288.1 Physcomitrella patens e_gw1.10.288.1 I 0.662
GRMZM2G471600 Zea mays GRMZM2G471600 I 0.661
MTR_1g013170 Medicago truncatula MTR_1g013170 I 0.661
PGSC0003DMG400028100 Solanum tuberosum PGSC0003DMG400028100 I 0.661
Solyc10g080960.1 Solanum lycopersicum Solyc10g080960.1 I 0.661