CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh_scip_prom.28083.4781
(
Phytophthora lateralis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh_scip_prom.28083.4781
T270904_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Phyra73031
M02332_2.00
Phytophthora ramorum
NDRKTCAGTN
NACTGAMYHN
PBM
Weirauch et al.(2014)
pTH7816
0.909
1.000
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.28083.4781
Myb
488
534
PRRWTKEEDDALRTAVENHREKNWKAIAAQVPGRNHTQCLQRWTKVL
fgenesh_scip_prom.28083.4781
Myb
540
585
KGHWSPHEDELLRRLVATEQKNWGDVAAKIPGRTSKQCRERWHNHL
fgenesh_scip_prom.28083.4781
Myb
591
635
RGAYTPEEDRLILEAQARLGNRWSVIAAMLPGRTEDAVKIRWKSH
Links
Other
Myb/SANT
family TFs
Other
Phytophthora lateralis
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm5307
Brugia malayi
Bm5307
N
EEL_0000159701
Elaeophora elaphi
EEL_0000159701
N
nDi.2.2.2.g02453
Dirofilaria immitis
nDi.2.2.2.g02453
N
nLs.2.1.2.g01634
Litomosoides sigmodontis
nLs.2.1.2.g01634
N
nOo.2.0.1.g05798
Onchocerca ochengi
nOo.2.0.1.g05798
N
OFLC_0001398601
Onchocerca flexuosa
OFLC_0001398601
N
TCLT_0000404101
Thelazia callipaeda
TCLT_0000404101
N
WBGene00241725
Onchocerca volvulus
WBGene00241725
N