CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g01634
(
Litomosoides sigmodontis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nLs.2.1.2.g01634
T155318_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t01634-RA
C2H2 ZF
125
147
YQCDICHMQFSQKANMHRHRMRH
nLs.2.1.2.t01634-RA
C2H2 ZF
153
175
YQCRYCLKKFFRKDQMQEHSMTH
nLs.2.1.2.t01634-RA
C2H2 ZF
182
207
FDCPVALCDKQFSQHASLRTHLDEAH
nLs.2.1.2.t01634-RA
C2H2 ZF
388
410
QECMHCGMIFMDQTLYLLHKGLH
nLs.2.1.2.t01634-RA
C2H2 ZF
416
440
WKCNLCGHGCGDKYMFTTHVISSDH
Links
Other
C2H2 ZF
family TFs
Other
Litomosoides sigmodontis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LOAG_01631
Loa loa
LOAG_01631
N
0.827
WBGene00241725
Onchocerca volvulus
WBGene00241725
N
0.827
EEL_0000159701
Elaeophora elaphi
EEL_0000159701
N
0.827
nOo.2.0.1.g05798
Onchocerca ochengi
nOo.2.0.1.g05798
N
0.827
OFLC_0001398601
Onchocerca flexuosa
OFLC_0001398601
N
0.827
TCLT_0000404101
Thelazia callipaeda
TCLT_0000404101
N
0.827
nDi.2.2.2.g02453
Dirofilaria immitis
nDi.2.2.2.g02453
N
0.783
Bm5307
Brugia malayi
Bm5307
N
0.781