GSMUA_Achr10G22620_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr10G22620_001 T272255_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.909 1.000
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.891 0.957
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.883 0.936
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.883 0.936
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.831 0.957
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P22620_001 Myb 611 661

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006507 Ailuropoda melanoleuca ENSAMEG00000006507 I
ZNF219 Callithrix jacchus ENSCJAG00000009382 I
ZNF219 Cavia porcellus ENSCPOG00000022085 I
ENSCSAG00000016599 Chlorocebus sabaeus ENSCSAG00000016599 I
ZNF219 Dasypus novemcinctus ENSDNOG00000019970 I
ZNF219 Equus caballus ENSECAG00000013524 I
ZNF219 Felis catus ENSFCAG00000014887 I
ZNF219 Homo sapiens ENSG00000165804 D
ZNF219 Gorilla gorilla ENSGGOG00000007177 I
ZNF219 Loxodonta africana ENSLAFG00000007094 I
ZNF219 Myotis lucifugus ENSMLUG00000006987 I
ZNF219 Macaca mulatta ENSMMUG00000006461 I
ENSMMUP00000008515 Macaca fascicularis ENSMMUP00000008515 I
ENSMPUG00000000156 Mustela putorius furo ENSMPUG00000000156 I
Zfp219 Mus musculus ENSMUSG00000049295 I
ENSNLEG00000014346 Nomascus leucogenys ENSNLEG00000014346 I
ENSOARG00000019679 Ovis aries ENSOARG00000019679 I
ZNF219 Oryctolagus cuniculus ENSOCUG00000009922 I
ZNF219 Otolemur garnettii ENSOGAG00000027894 I
ZNF219 Ochotona princeps ENSOPRG00000004914 I
ENSP00000354206-D1 Bos grunniens ENSP00000354206-D1 I
ENSPANG00000007539 Papio anubis ENSPANG00000007539 I
ENSPPYG00000005590 Pongo abelii ENSPPYG00000005590 I
ZNF219 Pan troglodytes ENSPTRG00000006114 I
Zfp219 Rattus norvegicus ENSRNOG00000011544 I
ENSSTOG00000024495 Ictidomys tridecemlineatus ENSSTOG00000024495 I
ZNF219 Tursiops truncatus ENSTTRG00000004281 I
Myotis_brandtii_ZNF219_10005327 Myotis brandtii Myotis_brandtii_ZNF219_10005327 I