GSMUA_Achr5G18600_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr5G18600_001 T272488_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.756 0.806
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.756 0.806
MYB15
M07084_2.00 		Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH
DRKTWGGTGRDDNDDNNDNNN		 Dap-seq
OMalley et al.(2016)
ATY19_col_a 		0.702 0.785
MYB15
M02699_2.00 		Arabidopsis thaliana
CCACCTACCSBBG
CVVSGGTAGGTGG		 SELEX
Mathelier et al.(2014)
MA0574.1 		0.702 0.785
MYB15
M11041_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_01 		0.702 0.785
MYB15
M11042_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_Q2 		0.702 0.785
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.690 0.720
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.690 0.720
AtMYB10
M07081_2.00 		Arabidopsis thaliana
YYYACCWAMCHHHHNH
DNDDDDGKTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB10_col_a 		0.685 0.710
AtMYB10
M07082_2.00 		Arabidopsis thaliana
NYYYACCWAMCHHH
DDDGKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB10_colamp_a 		0.685 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P18600_001 Myb 14 61
GSMUA_Achr5P18600_001 Myb 67 112

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

369 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG020665.1 Alligator sinensis Alligator_sinensis_CCG020665.1 I
Cmyd_10007606 Chelonia mydas Cmyd_10007606 I
ENSAMEG00000001160 Ailuropoda melanoleuca ENSAMEG00000001160 I
ENSAPLG00000013908 Anas platyrhynchos ENSAPLG00000013908 I
SETDB1 Bos taurus ENSBTAG00000000098 I
ENSBTAP00000000107-D1 Bos grunniens ENSBTAP00000000107-D1 I
SETDB1 Canis familiaris ENSCAFG00000023501 I
SETDB1 Choloepus hoffmanni ENSCHOG00000004013 I
SETDB1 Callithrix jacchus ENSCJAG00000006972 I
SETDB1 Cavia porcellus ENSCPOG00000001632 I
ENSCSAG00000018034 Chlorocebus sabaeus ENSCSAG00000018034 I
setdb1b Danio rerio ENSDARG00000099021 I
SETDB1 Dasypus novemcinctus ENSDNOG00000007754 I
Setdb1 Dipodomys ordii ENSDORG00000006830 I
SETDB1 Equus caballus ENSECAG00000023954 I
SETDB1 Erinaceus europaeus ENSEEUG00000015825 I
SETDB1 Felis catus ENSFCAG00000009655 I
SETDB1 Homo sapiens ENSG00000143379 D
setdb1b Gasterosteus aculeatus ENSGACG00000011675 I
SETDB1 Gallus gallus ENSGALG00000024051 I
ENSGALG00000029138 Gallus gallus ENSGALG00000029138 I
SETDB1 Gorilla gorilla ENSGGOG00000016308 I
ENSGMOG00000005993 Gadus morhua ENSGMOG00000005993 I
ENSLACG00000011159 Latimeria chalumnae ENSLACG00000011159 I
SETDB1 Loxodonta africana ENSLAFG00000004006 I
ENSMEUG00000000555 Macropus eugenii ENSMEUG00000000555 I
ENSMEUG00000006544 Macropus eugenii ENSMEUG00000006544 I
SETDB1 Meleagris gallopavo ENSMGAG00000001018 I
SETDB1 Microcebus murinus ENSMICG00000000425 I
SETDB1 Myotis lucifugus ENSMLUG00000010486 I
SETDB1 Macaca mulatta ENSMMUG00000023235 I
SETDB1 Monodelphis domestica ENSMODG00000018821 I
ENSMPUG00000004298 Mustela putorius furo ENSMPUG00000004298 I
Setdb1 Mus musculus ENSMUSG00000015697 I
ENSNLEG00000009996 Nomascus leucogenys ENSNLEG00000009996 I
ENSOANG00000028880 Ornithorhynchus anatinus ENSOANG00000028880 I
ENSOARG00000020880 Ovis aries ENSOARG00000020880 I
SETDB1 Oryctolagus cuniculus ENSOCUG00000003642 I
SETDB1 Otolemur garnettii ENSOGAG00000010320 I
ENSONIG00000006454 Oreochromis niloticus ENSONIG00000006454 I
SETDB1 Ochotona princeps ENSOPRG00000015349 I
setdb1b Oryzias latipes ENSORLG00000010602 I
ENSP00000357965 Macaca fascicularis ENSP00000357965 I
SETDB1 Procavia capensis ENSPCAG00000002527 I
ENSPFOG00000004429 Poecilia formosa ENSPFOG00000004429 I
ENSPFOG00000004623 Poecilia formosa ENSPFOG00000004623 I
ENSPPYG00000000887 Pongo abelii ENSPPYG00000000887 I
ENSPSIG00000008407 Pelodiscus sinensis ENSPSIG00000008407 I
SETDB1 Pan troglodytes ENSPTRG00000001267 I
SETDB1 Pteropus vampyrus ENSPVAG00000004355 I
Setdb1 Rattus norvegicus ENSRNOG00000021143 I
ENSSHAG00000012701 Sarcophilus harrisii ENSSHAG00000012701 I
SETDB1 Sus scrofa ENSSSCG00000006645 I
ENSSTOG00000006770 Ictidomys tridecemlineatus ENSSTOG00000006770 I
SETDB1 Tupaia belangeri ENSTBEG00000009306 I
SETDB1 Taeniopygia guttata ENSTGUG00000004684 I
setdb1b Tetraodon nigroviridis ENSTNIG00000008065 I
setdb1b Takifugu rubripes ENSTRUG00000014641 I
SETDB1 Tursiops truncatus ENSTTRG00000006966 I
SETDB1 Vicugna pacos ENSVPAG00000005440 I
ENSXMAG00000016600 Xiphophorus maculatus ENSXMAG00000016600 I
Myotis_brandtii_SETDB1_10031834 Myotis brandtii Myotis_brandtii_SETDB1_10031834 I
Pvit_04977 Pogona vitticeps Pvit_04977 I
setdb1.L Xenopus laevis XB-GENE-866480 I
XP_002935515 Xenopus tropicalis XP_002935515 I
XP_002935516 Xenopus tropicalis XP_002935516 I