OB04G29880 (Oryza brachyantha)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OB04G29880 T275283_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.805 0.804
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.805 0.804
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.805 0.804
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.805 0.804
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.805 0.804
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.800 0.783
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.788 0.848
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.788 0.848
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.778 0.804
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.758 0.783
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.758 0.783
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.758 0.783
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.732 0.739
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.732 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB04G29880.1 Myb 59 104

Links

Other Myb/SANT family TFs
Other Oryza brachyantha TFs

272 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAI26006 Xenopus laevis AAI26006 I 0.000
Aan_R001655 Calypte anna Aan_R001655 I 0.000
AAO72733 Xenopus laevis AAO72733 I 0.000
ABF71072 Xenopus laevis ABF71072 I 0.000
Afo_R010338 Aptenodytes forsteri Afo_R010338 I 0.000
Alligator_sinensis_CCG014229.1 Alligator sinensis Alligator_sinensis_CCG014229.1 I 0.000
Brh_R012268 Buceros rhinoceros Brh_R012268 I 0.000
Cmyd_10008490 Chelonia mydas Cmyd_10008490 I 0.000
HIF1A Anolis carolinensis ENSACAG00000016205 I 0.000
ENSAMXG00000019342 Astyanax mexicanus ENSAMXG00000019342 I 0.000
ENSAPLG00000002715 Anas platyrhynchos ENSAPLG00000002715 I 0.000
epas1b Danio rerio ENSDARG00000057671 N 0.000
ENSFALG00000003396 Ficedula albicollis ENSFALG00000003396 I 0.000
HIF1A Homo sapiens ENSG00000100644 D 0.000
HIF1A Gallus gallus ENSGALG00000011870 I 0.000
ENSLOCG00000010146 Lepisosteus oculatus ENSLOCG00000010146 I 0.000
HIF1A Meleagris gallopavo ENSMGAG00000013552 I 0.000
HIF1A Monodelphis domestica ENSMODG00000008760 I 0.000
Hif1a Mus musculus ENSMUSG00000021109 D 0.000
ENSONIG00000020112 Oreochromis niloticus ENSONIG00000020112 N 0.000
ENSORLG00000015698 Oryzias latipes ENSORLG00000015698 I 0.000
ENSPMAG00000000126 Petromyzon marinus ENSPMAG00000000126 N 0.000
ENSPSIG00000010467 Pelodiscus sinensis ENSPSIG00000010467 I 0.000
ENSSHAG00000012129 Sarcophilus harrisii ENSSHAG00000012129 I 0.000
HIF1A Taeniopygia guttata ENSTGUG00000012978 I 0.000
ENSTNIG00000019821 Tetraodon nigroviridis ENSTNIG00000019821 I 0.000
Ogr06281 Ophisaurus gracilis Ogr06281 I 0.000
Tal_R011146 Tyto alba Tal_R011146 I 0.000
hif1a Xenopus tropicalis XB-GENE-946622 I 0.000