PGSC0003DMG400028830 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400028830 T277704_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05732.1
M01276_2.00 		Cannabis sativa
HNATTCBNN
NNVGAATND		 PBM
Lambert et al.(2019)
pTH11367 		0.742 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400074183 Myb 14 65

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava15362.m1 Manihot esculenta cassava15362.m1 I 0.666
Cucsa.058770 Cucumis sativus Cucsa.058770 I 0.663
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I 0.666
GSMUA_Achr5G19200_001 Musa acuminata GSMUA_Achr5G19200_001 I 0.663
Lus10001149.g Linum usitatissimum Lus10001149.g I 0.684
MDP0000244794 Malus domestica MDP0000244794 I 0.681
PGSC0003DMG400000922 Solanum tuberosum PGSC0003DMG400000922 I 0.763
PGSC0003DMG400029440 Solanum tuberosum PGSC0003DMG400029440 I 0.663
PK05732.1 Cannabis sativa PK05732.1 D 0.742
Pm014775 Prunus mume Pm014775 I 0.699
POPTR_0004s01060 Populus trichocarpa POPTR_0004s01060 I 0.666
POPTR_0010s10990 Populus trichocarpa POPTR_0010s10990 I 0.663
PRUPE_ppa015662mg Prunus persica PRUPE_ppa015662mg I 0.666
PRUPE_ppa021540mg Prunus persica PRUPE_ppa021540mg I 0.687
SapurV1A.0429s0100 Salix purpurea SapurV1A.0429s0100 I 0.666
SapurV1A.3361s0010 Salix purpurea SapurV1A.3361s0010 I 0.666
Solyc12g006280.1 Solanum lycopersicum Solyc12g006280.1 I 0.909
TCM_001942 Theobroma cacao TCM_001942 I 0.664
TCM_030248 Theobroma cacao TCM_030248 I 0.666
Thhalv10017090m.g Eutrema salsugineum Thhalv10017090m.g I 0.666
Thhalv10020738m.g Eutrema salsugineum Thhalv10020738m.g I 0.665