CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0013s15060
(
Populus trichocarpa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
POPTR_0013s15060
T278444_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0013s15060.1
Myb
634
684
PKRWSLEEEDALREAVKKYGKGNWKLIWNSRRDVFQERTEVDLKDKWRNMT
Links
Other
Myb/SANT
family TFs
Other
Populus trichocarpa
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29889.m003386
Ricinus communis
29889.m003386
N
0.662
Ciclev10028601m.g
Citrus clementina
Ciclev10028601m.g
N
0.687
Cla013625
Citrullus lanatus
Cla013625
N
0.728
Cucsa.118910
Cucumis sativus
Cucsa.118910
N
0.720
MDP0000144544
Malus domestica
MDP0000144544
N
0.738
orange1.1g016046m.g
Citrus sinensis
orange1.1g016046m.g
N
0.687
PK07926.1
Cannabis sativa
PK07926.1
N
0.768
Pm000255
Prunus mume
Pm000255
N
0.687
POPTR_1462s00200
Populus trichocarpa
POPTR_1462s00200
N
0.671
PRUPE_ppa023474mg
Prunus persica
PRUPE_ppa023474mg
N
0.687
SapurV1A.0222s0230
Salix purpurea
SapurV1A.0222s0230
N
0.832