CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.118910
(
Cucumis sativus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cucsa.118910
T284417_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.118910.1
Myb
508
558
CKKWSLLEEDTLRTAVQRFGKGNWKLILSSYRDIFDERTEVDLKDKWRNMT
Cucsa.118910.2
Myb
508
548
CKKWSLLEEDTLRTAVQRFGKGNWKLILSSYRDIFDERTEV
Cucsa.118910.3
Myb
507
547
CKKWSLLEEDTLRTAVQRFGKGNWKLILSSYRDIFDERTEV
Cucsa.118910.4
Myb
507
547
CKKWSLLEEDTLRTAVQRFGKGNWKLILSSYRDIFDERTEV
Links
Other
Myb/SANT
family TFs
Other
Cucumis sativus
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla013625
Citrullus lanatus
Cla013625
N
0.901
Eucgr.B00490
Eucalyptus grandis
Eucgr.B00490
N
0.750
Eucgr.B00647
Eucalyptus grandis
Eucgr.B00647
N
0.750
MDP0000262878
Malus domestica
MDP0000262878
N
0.728
POPTR_0013s15060
Populus trichocarpa
POPTR_0013s15060
N
0.720
POPTR_1462s00200
Populus trichocarpa
POPTR_1462s00200
N
0.720
MDP0000144544
Malus domestica
MDP0000144544
N
0.708
Ciclev10028601m.g
Citrus clementina
Ciclev10028601m.g
N
0.679
orange1.1g016046m.g
Citrus sinensis
orange1.1g016046m.g
N
0.679
VIT_06s0004g08050
Vitis vinifera
VIT_06s0004g08050
N
0.664