Sb03g039470 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb03g039470 T279194_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.749 0.843
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.736 0.786
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.699 0.771
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.699 0.771
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.684 0.771
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb03g039470.1 Myb 65 111
Sb03g039470.1 Myb 117 163
Sb03g039470.1 Myb 169 214

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALUE_0001885601 Ascaris lumbricoides ALUE_0001885601 N
ANCCEY_01474 Ancylostoma ceylanicum ANCCEY_01474 N
ASU_15182 Ascaris suum ASU_15182 N
Bm6550 Brugia malayi Bm6550 N
CBG05690 Caenorhabditis briggsae CBG05690 N
CBN07630 Caenorhabditis brenneri CBN07630 N
CRE06043 Caenorhabditis remanei CRE06043 N
DME_0000028701 Dracunculus medinensis DME_0000028701 N
EEL_0000847601 Elaeophora elaphi EEL_0000847601 N
EVEC_0001283901 Enterobius vermicularis EVEC_0001283901 N
Hba_18486 Heterorhabditis bacteriophora Hba_18486 N
HPLM_0001382501 Haemonchus placei HPLM_0001382501 N
L889_g14208 Steinernema feltiae L889_g14208 N
L892_g27879 Steinernema scapterisci L892_g27879 I
LOAG_13296 Loa loa LOAG_13296 N
NBR_0000071001 Nippostrongylus brasiliensis NBR_0000071001 N
PTRK_0001116100 Parastrongyloides trichosuri PTRK_0001116100 N
SMUV_0000467601 Syphacia muris SMUV_0000467601 N
SMUV_0001103601 Syphacia muris SMUV_0001103601 N
SPAL_0001355700 Strongyloides papillosus SPAL_0001355700 N
SSTP_0000731600 Strongyloides stercoralis SSTP_0000731600 N
SSTP_0000839900 Strongyloides stercoralis SSTP_0000839900 N
TCLT_0000242201 Thelazia callipaeda TCLT_0000242201 N
dmd-3 Caenorhabditis elegans WBGene00012832 D
WBGene00242840 Onchocerca volvulus WBGene00242840 N