CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRAES3BF104600030CFD_g
(
Triticum aestivum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
TRAES3BF104600030CFD_g
T281031_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB3R5
M07116_2.00
Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN
Dap-seq
OMalley et al.(2016)
MYB3R5_col_a
0.760
0.864
PK12011.1
M01279_2.00
Cannabis sativa
HAACGGHHNN
NNDDCCGTTD
PBM
Lambert et al.(2019)
pTH11423
0.678
0.771
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRAES3BF104600030CFD_t1
Myb
66
112
KGGWTLQEDETLRKAVETFNGRSWKKIAEFFPDRTEVQCLHRWQKVL
TRAES3BF104600030CFD_t1
Myb
118
164
KGPWTQEEDDKIIDLVKKYGPTKWSVIARSLPGRIGKQCRERWHNHL
TRAES3BF104600030CFD_t1
Myb
170
215
KDAWTAEEEQALINAHREYGNKWAEIAKVLPGRTDNSIKNHWNSSL
Links
Other
Myb/SANT
family TFs
Other
Triticum aestivum
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy