CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R007440
(
Aptenodytes forsteri
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Afo_R007440
T282868_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Terf2
M02323_2.00
Mus musculus
NAACCCTAV
BTAGGGTTN
PBM
Weirauch et al.(2014)
pTH7805
0.700
0.723
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R007440
Myb
326
374
VGKWTMQESEWIKEGVKKFGEGRWKAICQKYPFQNRTAVMIKDRWRTMK
Links
Other
Myb/SANT
family TFs
Other
Aptenodytes forsteri
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G051793
Zea mays
GRMZM2G051793
N
LPERR07G02310
Leersia perrieri
LPERR07G02310
N
OB07G12010
Oryza brachyantha
OB07G12010
N
OBART07G02450
Oryza barthii
OBART07G02450
N
OGLUM07G14260
Oryza glumaepatula
OGLUM07G14260
N
OLONG_009970
Oryza longistaminata
OLONG_009970
N
OMERI01G11970
Oryza meridionalis
OMERI01G11970
N
ONIVA04G19340
Oryza nivara
ONIVA04G19340
N
OPUNC07G02500
Oryza punctata
OPUNC07G02500
N
ORGLA07G0021600
Oryza glaberrima
ORGLA07G0021600
N
ORUFI07G02320
Oryza rufipogon
ORUFI07G02320
N
Pavir.Ba03827
Panicum virgatum
Pavir.Ba03827
N
Pavir.Bb00243
Panicum virgatum
Pavir.Bb00243
N
Si028919m.g
Setaria italica
Si028919m.g
N