Pm000541 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm000541 T283437_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.667 0.720
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.667 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm000541 Myb 160 206
Pm000541 Myb 212 257

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000004743 Astyanax mexicanus ENSAMXG00000004743 N
bcl6a Danio rerio ENSDARG00000070864 N
bcl6a Gasterosteus aculeatus ENSGACG00000003839 N
ENSGMOG00000019214 Gadus morhua ENSGMOG00000019214 N
ENSLOCG00000005212 Lepisosteus oculatus ENSLOCG00000005212 N
bcl6a Oryzias latipes ENSORLG00000015589 N
ENSPFOG00000001561 Poecilia formosa ENSPFOG00000001561 N
bcl6a Tetraodon nigroviridis ENSTNIG00000013771 N
bcl6 Takifugu rubripes ENSTRUG00000002214 N
ENSXMAG00000016456 Xiphophorus maculatus ENSXMAG00000016456 N