Q948S4_TOBAC (Nicotiana tabacum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Q948S4_TOBAC T283696_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S4_TOBAC
M11073_2.00		 Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.683 0.754
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.670 0.725
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.670 0.725
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Q948S4_TOBAC Myb 55 100
Q948S4_TOBAC Myb 106 152
Q948S4_TOBAC Myb 158 202

Links

Other Myb/SANT family TFs
Other Nicotiana tabacum TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_054570 Acremonium chrysogenum ACRE_054570 N 0.000
Bcin02g08310 Botrytis cinerea Bcin02g08310 N 0.000
CFIO01_08071 Colletotrichum fioriniae CFIO01_08071 N 0.000
CGGC5_3607 Colletotrichum gloeosporioides CGGC5_3607 N 0.000
CH063_08900 Colletotrichum higginsianum CH063_08900 N 0.000
Cob_05888 Colletotrichum orbiculare Cob_05888 N 0.000
CSUB01_01660 Colletotrichum sublineola CSUB01_01660 N 0.000
CTHT_0048430 Chaetomium thermophilum CTHT_0048430 N 0.000
estExt_Genewise1.C_100108 Cryphonectria parasitica estExt_Genewise1.C_100108 N 0.000
FFUJ_13620 Fusarium fujikuroi FFUJ_13620 N 0.000
fgenesh1_pm.sca_3_chr4_2_0000036 Nectria haematococca fgenesh1_pm.sca_3_chr4_2_0000036 N 0.000
FGRRES_06382 Fusarium graminearum FGRRES_06382 N 0.000
FPSE_05827 Fusarium pseudograminearum FPSE_05827 N 0.000
GGTG_05245 Gaeumannomyces graminis GGTG_05245 N 0.000
GLRG_06776 Colletotrichum graminicola GLRG_06776 N 0.000
GMDG_04399 Pseudogymnoascus destructans GMDG_04399 N 0.000
MAC_07589 Metarhizium acridum MAC_07589 N 0.000
MAJ_08773 Metarhizium majus MAJ_08773 N 0.000
MANI_028863 Metarhizium anisopliae MANI_028863 N 0.000
MAPG_03623 Magnaporthe poae MAPG_03623 N 0.000
MBR_08228 Metarhizium brunneum MBR_08228 N 0.000
MGG_09562 Magnaporthe oryzae MGG_09562 N 0.000
MGU_03399 Metarhizium guizhouense MGU_03399 N 0.000
NCU02386 Neurospora crassa NCU02386 N 0.000
NechaG92421 Fusarium solani NechaG92421 N 0.000
OCS_00747 Ophiocordyceps sinensis OCS_00747 N 0.000
OCS_04593 Ophiocordyceps sinensis OCS_04593 N 0.000
PFICI_03549 Pestalotiopsis fici PFICI_03549 N 0.000
PV09_03404 Verruconis gallopava PV09_03404 N 0.000
SAPIO_CDS4519 Scedosporium apiospermum SAPIO_CDS4519 N 0.000
SBOR_2961 Sclerotinia borealis SBOR_2961 N 0.000
TRIATDRAFT_293053 Trichoderma atroviride TRIATDRAFT_293053 N 0.000
TRIVIDRAFT_74205 Trichoderma virens TRIVIDRAFT_74205 N 0.000
UCREL1_9565 Eutypa lata UCREL1_9565 N 0.000
V499_02769 Pseudogymnoascus pannorum V499_02769 N 0.000
VDAG_09459 Verticillium dahliae VDAG_09459 N 0.000
VHEMI08999 Torrubiella hemipterigena VHEMI08999 N 0.000
X797_000968 Metarhizium robertsii X797_000968 N 0.000
X797_003516 Metarhizium robertsii X797_003516 N 0.000