Aquca_013_00221 (Aquilegia coerulea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Aquca_013_00221 T285552_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.731 0.753
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.731 0.753
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.731 0.753
MYB61
M07002_2.00 		Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND		 Dap-seq
OMalley et al.(2016)
MYB61_col_a 		0.727 0.763
MYB61
M07003_2.00 		Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN		 Dap-seq
OMalley et al.(2016)
MYB61_colamp_a 		0.727 0.763
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.726 0.699
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.726 0.699
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.726 0.699
MYB46
M00877_2.00 		Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN		 PBM
Franco-Zorrilla et al.(2014)
MYB46 		0.682 0.699
MYB46
M11046_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB46_Q6 		0.682 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_013_00221.1 Myb 14 61
Aquca_013_00221.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Aquilegia coerulea TFs

582 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG18298 Caenorhabditis briggsae CBG18298 N
GPUH_0001628601 Gongylonema pulchrum GPUH_0001628601 N
L596_g11433 Steinernema carpocapsae L596_g11433 N
L889_g26113 Steinernema feltiae L889_g26113 N
L889_g26115 Steinernema feltiae L889_g26115 N
L892_g24984 Steinernema scapterisci L892_g24984 N
L893_g18130 Steinernema glaseri L893_g18130 N
L893_g29578 Steinernema glaseri L893_g29578 N
L898_g9348 Steinernema monticolum L898_g9348 N
LOAG_08235 Loa loa LOAG_08235 N
nDi.2.2.2.g07634 Dirofilaria immitis nDi.2.2.2.g07634 N
nLs.2.1.2.g07567 Litomosoides sigmodontis nLs.2.1.2.g07567 N
nOo.2.0.1.g05364 Onchocerca ochengi nOo.2.0.1.g05364 N
cey-4 Caenorhabditis elegans WBGene00000475 N
WBGene00246599 Onchocerca volvulus WBGene00246599 N
WUBG_17286 Wuchereria bancrofti WUBG_17286 N