CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g07567
(
Litomosoides sigmodontis
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
nLs.2.1.2.g07567
T165859_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t07567-RA
CSD
74
145
VKGRVKWYSVRYHYGFIARDDGKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVEGKQGPEAANVTGP
Links
Other
CSD
family TFs
Other
Litomosoides sigmodontis
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_17286
Wuchereria bancrofti
WUBG_17286
N
0.955
nDi.2.2.2.g07634
Dirofilaria immitis
nDi.2.2.2.g07634
N
0.955
WBGene00246599
Onchocerca volvulus
WBGene00246599
N
0.939
nOo.2.0.1.g05364
Onchocerca ochengi
nOo.2.0.1.g05364
N
0.939
LOAG_08235
Loa loa
LOAG_08235
N
0.924
ASU_02611
Ascaris suum
ASU_02611
N
0.909
GPUH_0001628601
Gongylonema pulchrum
GPUH_0001628601
N
0.909
OFLC_0001050101
Onchocerca flexuosa
OFLC_0001050101
N
0.906
ASU_02610
Ascaris suum
ASU_02610
N
0.879
TCNE_0001553801
Toxocara canis
TCNE_0001553801
N
0.879
TCNE_0001553601
Toxocara canis
TCNE_0001553601
N
0.833
nAv.1.0.1.g08857
Acanthocheilonema viteae
nAv.1.0.1.g08857
N
0.818
CBN20898
Caenorhabditis brenneri
CBN20898
N
0.788
CBN22260
Caenorhabditis brenneri
CBN22260
N
0.788
CBG02238
Caenorhabditis briggsae
CBG02238
N
0.773
CBN10862
Caenorhabditis brenneri
CBN10862
N
0.773
CRE03641
Caenorhabditis remanei
CRE03641
N
0.773
CRE03839
Caenorhabditis remanei
CRE03839
N
0.773
cey-2
Caenorhabditis elegans
WBGene00000473
N
0.773
NECAME_08819
Necator americanus
NECAME_08819
N
0.773
TCNE_0001553701
Toxocara canis
TCNE_0001553701
N
0.773
WUBG_08453
Wuchereria bancrofti
WUBG_08453
N
0.769
SVUK_0000788101
Strongylus vulgaris
SVUK_0000788101
N
0.762
CBN17666
Caenorhabditis brenneri
CBN17666
N
0.758
CJA04706
Caenorhabditis japonica
CJA04706
N
0.758
PPA14638
Pristionchus pacificus
PPA14638
N
0.758
ACAC_0001011001
Angiostrongylus cantonensis
ACAC_0001011001
N
0.758
ACOC_0000620901
Angiostrongylus costaricensis
ACOC_0000620901
N
0.758
ANCCAN_02239
Ancylostoma caninum
ANCCAN_02239
N
0.758
ANCDUO_12773
Ancylostoma duodenale
ANCDUO_12773
N
0.758
CGOC_0000831401
Cylicostephanus goldi
CGOC_0000831401
N
0.758
DICVIV_00632
Dictyocaulus viviparus
DICVIV_00632
N
0.758
HPBE_0002631501
Heligmosomoides bakeri
HPBE_0002631501
N
0.758
NBR_0001570201
Nippostrongylus brasiliensis
NBR_0001570201
N
0.758
scaffold516-EXSNAP2012.12
Pristionchus exspectatus
scaffold516-EXSNAP2012.12
N
0.758
ANCCEY_00663
Ancylostoma ceylanicum
ANCCEY_00663
N
0.757
cey-3
Caenorhabditis elegans
WBGene00000474
N
0.742
cey-4
Caenorhabditis elegans
WBGene00000475
N
0.742
DME_0000374801
Dracunculus medinensis
DME_0000374801
N
0.742
HCOI00011100
Haemonchus contortus
HCOI00011100
N
0.742
HCOI00340600
Haemonchus contortus
HCOI00340600
N
0.742
HPLM_0001619301
Haemonchus placei
HPLM_0001619301
N
0.742
ENSSHAG00000011350
Sarcophilus harrisii
ENSSHAG00000011350
I
0.738
TELCIR_12880
Teladorsagia circumcincta
TELCIR_12880
N
0.730
CBG11894
Caenorhabditis briggsae
CBG11894
N
0.727
L898_g9346
Steinernema monticolum
L898_g9346
N
0.727
YBX1
Loxodonta africana
ENSLAFG00000031170
I
0.718
CBG18298
Caenorhabditis briggsae
CBG18298
N
0.712
CRE04844
Caenorhabditis remanei
CRE04844
N
0.712
L596_g11433
Steinernema carpocapsae
L596_g11433
N
0.712
L893_g29578
Steinernema glaseri
L893_g29578
N
0.712
L898_g9348
Steinernema monticolum
L898_g9348
N
0.712
ENSFCAG00000022604
Felis catus
ENSFCAG00000022604
I
0.708
ENSOCUG00000028047
Oryctolagus cuniculus
ENSOCUG00000028047
I
0.708
Afo_R006672
Aptenodytes forsteri
Afo_R006672
I
0.708
Brh_R010004
Buceros rhinoceros
Brh_R010004
I
0.708
Gfo_R009480
Geospiza fortis
Gfo_R009480
I
0.708
Tal_R011198
Tyto alba
Tal_R011198
I
0.708
Cmyd_10003103
Chelonia mydas
Cmyd_10003103
I
0.703
YBX3
Tursiops truncatus
ENSTTRG00000008045
I
0.702
CBG14892
Caenorhabditis briggsae
CBG14892
N
0.700
ENSMLUG00000029452
Myotis lucifugus
ENSMLUG00000029452
I
0.700
ENSOCUG00000024588
Oryctolagus cuniculus
ENSOCUG00000024588
I
0.700