CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.7128s0053
(
Boechera stricta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Bostr.7128s0053
T285887_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT1G72740
M07033_2.00
Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD
Dap-seq
OMalley et al.(2016)
AT1G72740_col_a
0.673
0.745
AT1G72740
M07034_2.00
Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND
Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a
0.673
0.745
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.7128s0053.1.p
Myb
6
58
KNKWTVEEEEALLAGIAKHGYGKWANIVEDPEFAPQLLDRTNINLKDKWRNMK
Links
Other
Myb/SANT
family TFs
Other
Boechera stricta
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
lz
Drosophila melanogaster
FBgn0002576
D
0.000
GG18309
Drosophila erecta
FBgn0110525
I
0.000
GI14398
Drosophila mojavensis
FBgn0137150
I
0.000
GL16499
Drosophila persimilis
FBgn0154103
I
0.000
GM22478
Drosophila sechellia
FBgn0177348
I
0.000
GJ18742
Drosophila virilis
FBgn0205894
I
0.000
GK25373
Drosophila willistoni
FBgn0227332
I
0.000
GE17788
Drosophila yakuba
FBgn0235232
I
0.000
GA22609
Drosophila pseudoobscura
FBgn0244012
I
0.000