Cagra.5588s0009 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.5588s0009 T286166_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.828 0.894
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.828 0.894
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.820 0.872
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.820 0.851
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.802 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.5588s0009.1.p Myb 545 595

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_090530 Acremonium chrysogenum ACRE_090530 N 0.000
BBA_05678 Beauveria bassiana BBA_05678 N 0.000
BBA_09096 Beauveria bassiana BBA_09096 N 0.000
Bcin08g05570 Botrytis cinerea Bcin08g05570 N 0.000
CCM_07309 Cordyceps militaris CCM_07309 N 0.000
CFIO01_05100 Colletotrichum fioriniae CFIO01_05100 N 0.000
CGGC5_7812 Colletotrichum gloeosporioides CGGC5_7812 N 0.000
CH063_07963 Colletotrichum higginsianum CH063_07963 N 0.000
CHGG_06117 Chaetomium globosum CHGG_06117 N 0.000
Cob_02607 Colletotrichum orbiculare Cob_02607 N 0.000
CPUR_04593 Claviceps purpurea CPUR_04593 N 0.000
CSUB01_00007 Colletotrichum sublineola CSUB01_00007 N 0.000
estExt_Genewise1Plus.C_110189 Cryphonectria parasitica estExt_Genewise1Plus.C_110189 N 0.000
estExt_Genewise1Plus.C_70270 Neurospora discreta estExt_Genewise1Plus.C_70270 N 0.000
FFUJ_05577 Fusarium fujikuroi FFUJ_05577 N 0.000
fgenesh1_pm.sca_54_chr3_4_0000024 Nectria haematococca fgenesh1_pm.sca_54_chr3_4_0000024 N 0.000
FGRRES_16399 Fusarium graminearum FGRRES_16399 N 0.000
FPSE_05593 Fusarium pseudograminearum FPSE_05593 N 0.000
FVEG_13110 Fusarium verticillioides FVEG_13110 N 0.000
GGTG_04996 Gaeumannomyces graminis GGTG_04996 N 0.000
GLRG_02657 Colletotrichum graminicola GLRG_02657 N 0.000
HMPREF1624_04976 Sporothrix schenckii HMPREF1624_04976 N 0.000
MAC_07722 Metarhizium acridum MAC_07722 N 0.000
MAC_08257 Metarhizium acridum MAC_08257 N 0.000
MAJ_06521 Metarhizium majus MAJ_06521 N 0.000
MANI_114498 Metarhizium anisopliae MANI_114498 N 0.000
MBR_06341 Metarhizium brunneum MBR_06341 N 0.000
MGG_09002 Magnaporthe oryzae MGG_09002 N 0.000
MGU_06147 Metarhizium guizhouense MGU_06147 N 0.000
MYCTH_2089183 Myceliophthora thermophila MYCTH_2089183 N 0.000
vad-6 Neurospora crassa NCU09205 N 0.000
NechaG92211 Fusarium solani NechaG92211 N 0.000
NEUTE1DRAFT_125863 Neurospora tetrasperma NEUTE1DRAFT_125863 N 0.000
OIDMADRAFT_152191 Oidiodendron maius OIDMADRAFT_152191 N 0.000
PFICI_13325 Pestalotiopsis fici PFICI_13325 N 0.000
PODANS_1_15900 Podospora anserina PODANS_1_15900 N 0.000
S40285_05622 Stachybotrys chlorohalonata S40285_05622 N 0.000
S40288_07943 Stachybotrys chartarum S40288_07943 N 0.000
S40288_09581 Stachybotrys chartarum S40288_09581 N 0.000
SAPIO_CDS4869 Scedosporium apiospermum SAPIO_CDS4869 N 0.000
SBOR_4456 Sclerotinia borealis SBOR_4456 N 0.000
SMAC_00182 Sordaria macrospora SMAC_00182 N 0.000
THITE_2112671 Thielavia terrestris THITE_2112671 N 0.000
TRIATDRAFT_293894 Trichoderma atroviride TRIATDRAFT_293894 N 0.000
TRIREDRAFT_76705 Trichoderma reesei TRIREDRAFT_76705 N 0.000
TRIVIDRAFT_113690 Trichoderma virens TRIVIDRAFT_113690 N 0.000
UV8b_3402 Ustilaginoidea virens UV8b_3402 N 0.000
VDBG_01884 Verticillium alfalfae VDBG_01884 N 0.000
VDBG_01884 Verticillium albo atrum VDBG_01884 N 0.000
VHEMI05419 Torrubiella hemipterigena VHEMI05419 N 0.000
X797_007680 Metarhizium robertsii X797_007680 N 0.000