CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_18.208
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.supercontig_18.208
T287079_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_18.208
Myb
51
97
KGGWTQKEDENLISAVQKYKGKNWKKIAECVPDRTDVQCLHRWQKVL
evm.model.supercontig_18.208
Myb
103
149
KGPWSIEEDNLIIKIVGEQGNKKWSEIAKHLPGRIGKQCRERWYNHL
evm.model.supercontig_18.208
Myb
155
197
RSAWTKEEEIILITAHREHGNKWAEIAKLLPGRTENSIKNHWN
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava40167.m1
Manihot esculenta
cassava40167.m1
I
0.673
gene19115-v1.0-hybrid
Fragaria vesca
gene19115-v1.0-hybrid
I
0.723
Gorai.008G117400
Gossypium raimondii
Gorai.008G117400
N
0.675
Pm018007
Prunus mume
Pm018007
I
0.719
ATMYB3R2
Populus trichocarpa
POPTR_0014s07520
N
0.682
PRUPE_ppa022218mg
Prunus persica
PRUPE_ppa022218mg
I
0.725
SapurV1A.0533s0050
Salix purpurea
SapurV1A.0533s0050
N
0.690
SapurV1A.0586s0030
Salix purpurea
SapurV1A.0586s0030
N
0.690
TCM_005402
Theobroma cacao
TCM_005402
I
0.710
ATMYB3R2
Vitis vinifera
VIT_15s0048g02120
N
0.679