gene05764-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene05764-v1.0-hybrid T287249_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.857 0.915
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.778 0.915
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.778 0.915
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.778 0.915
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.778 0.915
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.722 0.809
estExt_fgenesh1_pg.C_Chr_13.00010057
M02366_2.00 		Ostreococcus tauri
NRMCCTANN
NNTAGGKYN		 PBM
Weirauch et al.(2014)
pTH9424 		0.714 0.660
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna05764.1-v1.0-hybrid Myb 5 57

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BDDG_09840 Blastomyces dermatitidis BDDG_09840 N 0.000
ACLA_098580 Aspergillus clavatus CADACLAG00009113 N 0.000
AFUA_6G01960 Aspergillus fumigatus CADAFUAG00000662 N 0.000
CADANGAG00010337 Aspergillus niger CADANGAG00010337 N 0.000
ANIA_08666 Aspergillus nidulans CADANIAG00006379 N 0.000
NFIA_048150 Neosartorya fischeri CADNFIAG00004366 N 0.000
CIMG_09999 Coccidioides immitis CIMG_09999 N 0.000
CPC735_011650 Coccidioides posadasii CPC735_011650 N 0.000
EURHEDRAFT_460941 Aspergillus ruber EURHEDRAFT_460941 N 0.000
e_gw1.00169.1.1 Aspergillus carbonarius e_gw1.00169.1.1 N 0.000
H102_08817 Trichophyton rubrum H102_08817 N 0.000
H105_08842 Trichophyton soudanense H105_08842 N 0.000
HCBG_02942 Histoplasma capsulatum HCBG_02942 N 0.000
MCYG_02975 Microsporum canis MCYG_02975 N 0.000
MCYG_02975 Arthroderma otae MCYG_02975 N 0.000
PAAG_04477 Paracoccidioides sp lutzii PAAG_04477 N 0.000
PABG_04267 Paracoccidioides brasiliensis PABG_04267 N 0.000
Pc22g24500 Penicillium chrysogenum Pc22g24500 N 0.000
PCH_Pc22g24500 Penicillium rubens PCH_Pc22g24500 N 0.000
PDE_03331 Penicillium oxalicum PDE_03331 N 0.000
PITC_054260 Penicillium italicum PITC_054260 N 0.000
PMAA_093440 Talaromyces marneffei PMAA_093440 N 0.000
PMAA_093440 Penicillium marneffei PMAA_093440 N 0.000
PVAR5_7535 Byssochlamys spectabilis PVAR5_7535 N 0.000
TEQG_06658 Trichophyton equinum TEQG_06658 N 0.000
TSTA_047890 Talaromyces stipitatus TSTA_047890 N 0.000
U727_00431231441 Penicillium solitum U727_00431231441 N 0.000
UREG_06021 Uncinocarpus reesii UREG_06021 N 0.000
W97_05488 Coniosporium apollinis W97_05488 N 0.000