orange1.1g022439m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g022439m.g T288840_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SRM1
M02307_2.00 		Arabidopsis thaliana
NNHNATCNN
NNGATNDNN		 PBM
Weirauch et al.(2014)
pTH7080 		0.733 0.837
SRM1
M07121_2.00 		Arabidopsis thaliana
YCTTATCYWHW
WDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a 		0.733 0.837
SRM1
M07122_2.00 		Arabidopsis thaliana
YCTTATCYWHWWH
DWWDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_col_b 		0.733 0.837
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g022439m Myb 123 168

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003602 Aedes aegypti AAEL003602 N
AALB005765 Anopheles albimanus AALB005765 N
AARA007771 Anopheles arabiensis AARA007771 N
AATE006171 Anopheles atroparvus AATE006171 N
ACHR001790 Anopheles christyi ACHR001790 N
ACUA006984 Anopheles culicifacies ACUA006984 N
ADIR008055 Anopheles dirus ADIR008055 N
AEPI001699 Anopheles epiroticus AEPI001699 N
AFAF012484 Anopheles farauti AFAF012484 N
AFUN008026 Anopheles funestus AFUN008026 N
AGAP007109 Anopheles gambiae AGAP007109 N
Alligator_sinensis_CCG009248.1 Alligator sinensis Alligator_sinensis_CCG009248.1 N
AMAM024265 Anopheles maculatus AMAM024265 N
AMEC009079 Anopheles melas AMEC009079 N
AMEC019433 Anopheles melas AMEC019433 N
AMEM014597 Anopheles merus AMEM014597 N
AMIN011248 Anopheles minimus AMIN011248 N
AQUA002036 Anopheles quadriannulatus AQUA002036 N
ASIS021384 Anopheles sinensis ASIS021384 N
ASTEI06883 Anopheles stephensi ASTEI06883 N
BGIBMGA012741 Bombyx mori BGIBMGA012741 N
CapteG221467 Capitella teleta CapteG221467 N
CPIJ004963 Culex quinquefasciatus CPIJ004963 N
CpipJ_CPIJ004963 Culex pipiens CpipJ_CPIJ004963 N
PRDM8 Anolis carolinensis ENSACAG00000010106 N
ENSAMXG00000020060 Astyanax mexicanus ENSAMXG00000020060 N
PRDM8 Canis familiaris ENSCAFG00000008881 N
PRDM8 Callithrix jacchus ENSCJAG00000015064 N
PRDM8 Cavia porcellus ENSCPOG00000019738 N
ENSCSAG00000004478 Chlorocebus sabaeus ENSCSAG00000004478 N
prdm8b Danio rerio ENSDARG00000054683 N
PRDM8 Dasypus novemcinctus ENSDNOG00000011667 N
ENSECAG00000017767 Equus caballus ENSECAG00000017767 N
ENSFCAG00000026794 Felis catus ENSFCAG00000026794 N
PRDM8 Homo sapiens ENSG00000152784 N
ENSGALG00000026560 Gallus gallus ENSGALG00000026560 N
PRDM8 Gorilla gorilla ENSGGOG00000007501 N
ENSGMOG00000016370 Gadus morhua ENSGMOG00000016370 N
ENSLACG00000001866 Latimeria chalumnae ENSLACG00000001866 N
ENSLOCG00000007226 Lepisosteus oculatus ENSLOCG00000007226 N
ENSMEUG00000015872 Macropus eugenii ENSMEUG00000015872 N
PRDM8 Myotis lucifugus ENSMLUG00000030190 N
PRDM8 Macaca mulatta ENSMMUG00000003338 N
PRDM8 Monodelphis domestica ENSMODG00000020789 N
ENSMPUG00000006558 Mustela putorius furo ENSMPUG00000006558 N
Prdm8 Mus musculus ENSMUSG00000035456 N
ENSNLEG00000008504 Nomascus leucogenys ENSNLEG00000008504 N
ENSOARG00000018972 Ovis aries ENSOARG00000018972 N
ENSOGAG00000026262 Otolemur garnettii ENSOGAG00000026262 N
ENSONIG00000014038 Oreochromis niloticus ENSONIG00000014038 N
prdm8b Oryzias latipes ENSORLG00000017786 N
ENSP00000406998 Macaca fascicularis ENSP00000406998 N
ENSPANG00000024349 Papio anubis ENSPANG00000024349 N
PRDM8 Procavia capensis ENSPCAG00000001081 N
ENSPFOG00000011716 Poecilia formosa ENSPFOG00000011716 N
ENSPMAG00000005756 Petromyzon marinus ENSPMAG00000005756 N
ENSPPYG00000014879 Pongo abelii ENSPPYG00000014879 N
Prdm8 Rattus norvegicus ENSRNOG00000002004 N
PRDM8 Sorex araneus ENSSARG00000009823 N
ENSSHAG00000018147 Sarcophilus harrisii ENSSHAG00000018147 N
ENSSTOG00000015688 Ictidomys tridecemlineatus ENSSTOG00000015688 N
PRDM8 Tupaia belangeri ENSTBEG00000006138 N
prdm8b Tetraodon nigroviridis ENSTNIG00000016712 N
prdm8b Takifugu rubripes ENSTRUG00000001003 N
ENSXMAG00000009993 Xiphophorus maculatus ENSXMAG00000009993 N
fgenesh2_pg.scaffold_282000018 Branchiostoma floridae fgenesh2_pg.scaffold_282000018 N
HMEL017852 Heliconius melpomene HMEL017852 N
ISCW009928 Ixodes scapularis ISCW009928 N
KGM_11907 Danaus plexippus KGM_11907 N
L798_05037 Zootermopsis nevadensis L798_05037 N
LCUP008185 Lucilia cuprina LCUP008185 N
LDEC001191 Leptinotarsa decemlineata LDEC001191 N
LotgiG69958 Lottia gigantea LotgiG69958 N
MCINX010301 Melitaea cinxia MCINX010301 N
MDOA007546 Musca domestica MDOA007546 N
Ocbimv22006527m.g Octopus bimaculoides Ocbimv22006527m.g N
Ogr08710 Ophisaurus gracilis Ogr08710 N
PHUM271650 Pediculus humanus PHUM271650 N
PPAI006396 Phlebotomus papatasi PPAI006396 N
Pvit_15291 Pogona vitticeps Pvit_15291 N
Sakowv30017448m.g Saccoglossus kowalevskii Sakowv30017448m.g N
SMAR006435 Strigamia maritima SMAR006435 N
SMU15028407 Schmidtea mediterranea SMU15028407 N
TC013073 Tribolium castaneum TC013073 N
tetur11g03890 Tetranychus urticae tetur11g03890 N
prdm8 Xenopus tropicalis XB-GENE-984391 N