CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SapurV1A.0571s0110
(
Salix purpurea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
SapurV1A.0571s0110
T289761_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB118
M07087_2.00
Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH
Dap-seq
OMalley et al.(2016)
MYB118_col_a
0.738
0.817
MYB118
M07088_2.00
Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH
Dap-seq
OMalley et al.(2016)
MYB118_colamp_a
0.738
0.817
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0571s0110.1.p
Myb
210
256
KGQWSPQEDRLLVHLVKQYGIKKWSLIAKMLEGRVGKQCRERWHNHL
SapurV1A.0571s0110.1.p
Myb
262
307
KDAWSEEEDEILIKAHRDIGNRWAEIAKRLPGRTENTIKNHWNATK
Links
Other
Myb/SANT
family TFs
Other
Salix purpurea
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZBTB4
Felis catus
ENSFCAG00000029504
N
ENSGMOG00000007716
Gadus morhua
ENSGMOG00000007716
N
ENSMICG00000000950
Microcebus murinus
ENSMICG00000000950
N
ENSMODG00000006962
Monodelphis domestica
ENSMODG00000006962
N
ENSPFOG00000008187
Poecilia formosa
ENSPFOG00000008187
N
ENSTNIG00000001659
Tetraodon nigroviridis
ENSTNIG00000001659
N
ENSTRUG00000012490
Takifugu rubripes
ENSTRUG00000012490
N