chr5.CM0096.100.nc (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 chr5.CM0096.100.nc T290729_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.751 0.849
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.751 0.849
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.751 0.849
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.743 0.839
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.743 0.839
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.743 0.839
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.738 0.839
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.726 0.806
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.712 0.817
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.712 0.817
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.712 0.817
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.712 0.817
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.712 0.817
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr5.CM0096.100.nc Myb 5 51
chr5.CM0096.100.nc Myb 57 102

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

282 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC205562.3_FG002 Zea mays AC205562.3_FG002 I
WRKY46 Arabidopsis thaliana AT2G46400 D
WRKY49 Arabidopsis thaliana AT5G43290 I
BGIOSGA012571 Oryza indica BGIOSGA012571 I
BGIOSGA017860 Oryza indica BGIOSGA017860 I
BGIOSGA019621 Oryza indica BGIOSGA019621 I
BGIOSGA030346 Oryza indica BGIOSGA030346 I
BGIOSGA034612 Oryza indica BGIOSGA034612 I
BGIOSGA036756 Oryza indica BGIOSGA036756 N
BGIOSGA040489 Oryza indica BGIOSGA040489 I
Bo3g035140 Brassica oleracea Bo3g035140 I
Bo4g101290 Brassica oleracea Bo4g101290 I
Bo4g190390 Brassica oleracea Bo4g190390 I
Bostr.13158s0168 Boechera stricta Bostr.13158s0168 I
Bostr.25993s0129 Boechera stricta Bostr.25993s0129 I
Bra000203 Brassica rapa Bra000203 I
Bra004586 Brassica rapa Bra004586 I
Bra014426 Brassica rapa Bra014426 I
Bra016974 Brassica rapa Bra016974 I
BRADI1G17660 Brachypodium distachyon BRADI1G17660 I
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I
BRADI3G34850 Brachypodium distachyon BRADI3G34850 I
BRADI4G28280 Brachypodium distachyon BRADI4G28280 I
BRADI4G44342 Brachypodium distachyon BRADI4G44342 N
Cagra.0050s0059 Capsella grandiflora Cagra.0050s0059 I
Cagra.0483s0080 Capsella grandiflora Cagra.0483s0080 I
Carubv10019489m.g Capsella rubella Carubv10019489m.g I
Carubv10023578m.g Capsella rubella Carubv10023578m.g I
chr2.CM0641.50.nc Lotus japonicus chr2.CM0641.50.nc I
Cucsa.042350 Cucumis sativus Cucsa.042350 I
F775_07376 Aegilops tauschii F775_07376 I
F775_15928 Aegilops tauschii F775_15928 I
F775_21933 Aegilops tauschii F775_21933 I
fgenesh1_pm.C_scaffold_5002145 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5002145 I
GRMZM2G025895 Zea mays GRMZM2G025895 I
GRMZM2G059562 Zea mays GRMZM2G059562 I
GRMZM2G061408 Zea mays GRMZM2G061408 I
GRMZM2G169564 Zea mays GRMZM2G169564 N
GRMZM2G324999 Zea mays GRMZM2G324999 I
GRMZM2G381378 Zea mays GRMZM2G381378 I
GSMUA_Achr5G07490_001 Musa acuminata GSMUA_Achr5G07490_001 I
LPERR03G14340 Leersia perrieri LPERR03G14340 I
LPERR05G16150 Leersia perrieri LPERR05G16150 I
LPERR05G16170 Leersia perrieri LPERR05G16170 I
LPERR07G23280 Leersia perrieri LPERR07G23280 I
LPERR11G00970 Leersia perrieri LPERR11G00970 N
LPERR12G01080 Leersia perrieri LPERR12G01080 N
mgf023486m Mimulus guttatus mgf023486m I
MLOC_74606 Hordeum vulgare MLOC_74606 I
MLOC_74884 Hordeum vulgare MLOC_74884 I
MLOC_74974 Hordeum vulgare MLOC_74974 I
MLOC_78461 Hordeum vulgare MLOC_78461 I
OB03G26140 Oryza brachyantha OB03G26140 I
OB05G27830 Oryza brachyantha OB05G27830 I
OB05G27850 Oryza brachyantha OB05G27850 I
OB07G31890 Oryza brachyantha OB07G31890 I
OB11G10760 Oryza brachyantha OB11G10760 N
OB12G11030 Oryza brachyantha OB12G11030 N
OBART03G16400 Oryza barthii OBART03G16400 I
OBART05G11710 Oryza barthii OBART05G11710 I
OBART05G20330 Oryza barthii OBART05G20330 I
OBART05G20340 Oryza barthii OBART05G20340 I
OBART07G26430 Oryza barthii OBART07G26430 I
OBART11G01110 Oryza barthii OBART11G01110 I
OBART12G00850 Oryza barthii OBART12G00850 N
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I
OGLUM05G12430 Oryza glumaepatula OGLUM05G12430 I
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I
OGLUM05G21440 Oryza glumaepatula OGLUM05G21440 I
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I
OGLUM07G10380 Oryza glumaepatula OGLUM07G10380 I
OGLUM07G26470 Oryza glumaepatula OGLUM07G26470 I
OGLUM11G00870 Oryza glumaepatula OGLUM11G00870 I
OLONG_008209 Oryza longistaminata OLONG_008209 I
OLONG_024544 Oryza longistaminata OLONG_024544 I
OLONG_027124 Oryza longistaminata OLONG_027124 I
OMERI03G14670 Oryza meridionalis OMERI03G14670 I
OMERI05G10380 Oryza meridionalis OMERI05G10380 I
OMERI05G18170 Oryza meridionalis OMERI05G18170 I
OMERI05G18250 Oryza meridionalis OMERI05G18250 I
OMERI05G18260 Oryza meridionalis OMERI05G18260 I
OMERI07G23060 Oryza meridionalis OMERI07G23060 I
OMERI08G11390 Oryza meridionalis OMERI08G11390 I
OMERI11G01570 Oryza meridionalis OMERI11G01570 N
ONIVA03G17390 Oryza nivara ONIVA03G17390 I
ONIVA05G12100 Oryza nivara ONIVA05G12100 I
ONIVA05G21440 Oryza nivara ONIVA05G21440 I
ONIVA05G21460 Oryza nivara ONIVA05G21460 I
ONIVA07G26140 Oryza nivara ONIVA07G26140 I
ONIVA08G13920 Oryza nivara ONIVA08G13920 I
ONIVA11G01240 Oryza nivara ONIVA11G01240 I
OPUNC05G10020 Oryza punctata OPUNC05G10020 I
OPUNC05G17980 Oryza punctata OPUNC05G17980 I
OPUNC05G18000 Oryza punctata OPUNC05G18000 I
OPUNC05G18030 Oryza punctata OPUNC05G18030 I
OPUNC07G24890 Oryza punctata OPUNC07G24890 I
OPUNC09G05480 Oryza punctata OPUNC09G05480 I
OPUNC11G00980 Oryza punctata OPUNC11G00980 N
OPUNC12G00990 Oryza punctata OPUNC12G00990 N
orange1.1g008458m.g Citrus sinensis orange1.1g008458m.g I
ORGLA05G0099400 Oryza glaberrima ORGLA05G0099400 I
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I
ORGLA07G0207800 Oryza glaberrima ORGLA07G0207800 I
ORGLA08G0116200 Oryza glaberrima ORGLA08G0116200 I
ORGLA11G0202000 Oryza glaberrima ORGLA11G0202000 I
ORGLA12G0007600 Oryza glaberrima ORGLA12G0007600 N
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I
ORUFI05G12710 Oryza rufipogon ORUFI05G12710 I
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I
ORUFI07G27440 Oryza rufipogon ORUFI07G27440 I
ORUFI08G15010 Oryza rufipogon ORUFI08G15010 I
OS03G0335200 Oryza sativa OS03G0335200 I
OS05G0322900 Oryza sativa OS05G0322900 I
OS05G0478400 Oryza sativa OS05G0478400 I
OS05G0478800 Oryza sativa OS05G0478800 I
OS07G0680400 Oryza sativa OS07G0680400 I
OS08G0386200 Oryza sativa OS08G0386200 I
OS11G0117500 Oryza sativa OS11G0117500 N
OS12G0116700 Oryza sativa OS12G0116700 N
Pavir.Ba00227 Panicum virgatum Pavir.Ba00227 I
Pavir.Bb03750 Panicum virgatum Pavir.Bb03750 N
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I
Pavir.Ea03258 Panicum virgatum Pavir.Ea03258 I
Pavir.Eb03563 Panicum virgatum Pavir.Eb03563 I
Pavir.Fa01520 Panicum virgatum Pavir.Fa01520 I
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I
Pavir.J05812 Panicum virgatum Pavir.J05812 I
Pavir.J34713 Panicum virgatum Pavir.J34713 N
Pavir.J39511 Panicum virgatum Pavir.J39511 I
PDK_20s1440981g001 Phoenix dactylifera PDK_20s1440981g001 I
PGSC0003DMG400000211 Solanum tuberosum PGSC0003DMG400000211 I
PGSC0003DMG400040494 Solanum tuberosum PGSC0003DMG400040494 I
PK10616.1 Cannabis sativa PK10616.1 I
Sb01g036180 Sorghum bicolor Sb01g036180 I
Sb02g043030 Sorghum bicolor Sb02g043030 I
Sb05g001220 Sorghum bicolor Sb05g001220 N
Sb07g019400 Sorghum bicolor Sb07g019400 I
Sb08g002560 Sorghum bicolor Sb08g002560 N
scaffold_800734.1 Arabidopsis lyrata scaffold_800734.1 I
SELMODRAFT_29702 Selaginella moellendorffii SELMODRAFT_29702 I
SELMODRAFT_29703 Selaginella moellendorffii SELMODRAFT_29703 I
Si002401m.g Setaria italica Si002401m.g I
Si010764m.g Setaria italica Si010764m.g N
Si019098m.g Setaria italica Si019098m.g N
Si030395m.g Setaria italica Si030395m.g I
Si030528m.g Setaria italica Si030528m.g I
Si036565m.g Setaria italica Si036565m.g I
Solyc01g095630.2 Solanum lycopersicum Solyc01g095630.2 I
Traes_2AS_6269D889E Triticum aestivum Traes_2AS_6269D889E I
Traes_2BS_B65714572 Triticum aestivum Traes_2BS_B65714572 I
Traes_4AS_0DA136E0E Triticum aestivum Traes_4AS_0DA136E0E I
TRIUR3_06813 Triticum urartu TRIUR3_06813 I