Bo8g108300 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo8g108300 T292467_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC007
M07164_2.00 		Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA		 Dap-seq
OMalley et al.(2016)
VND4_colamp_a 		0.974 0.982
NAC007
M07165_2.00 		Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA		 Dap-seq
OMalley et al.(2016)
VND4_col 		0.974 0.982
NAC037
M07187_2.00 		Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG		 Dap-seq
OMalley et al.(2016)
VND1_col_a 		0.927 0.825
ANAC076
M07224_2.00 		Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA		 Dap-seq
OMalley et al.(2016)
VND2_col_a 		0.922 0.825
ANAC076
M07225_2.00 		Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA		 Dap-seq
OMalley et al.(2016)
VND2_colamp_a 		0.922 0.825
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g108300.1 NAC/NAM 8 135

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

274 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP15315 Atta cephalotes ACEP15315 N 0.000
ADIR004612 Anopheles dirus ADIR004612 N 0.000
AEPI000661 Anopheles epiroticus AEPI000661 N 0.000
ASIS006297 Anopheles sinensis ASIS006297 N 0.000
CRE03357 Caenorhabditis remanei CRE03357 N 0.000
D918_03763 Trichuris suis D918_03763 N 0.000
DILT_0001312701 Diphyllobothrium latum DILT_0001312701 N 0.000
ECPE_0000273401 Echinostoma caproni ECPE_0000273401 N 0.000
GK18638 Drosophila willistoni FBgn0220636 N 0.000
GK24890 Drosophila willistoni FBgn0226849 N 0.000
fgenesh1_kg.C_scaffold_16000108 Phytophthora capsici fgenesh1_kg.C_scaffold_16000108 N 0.000
LOAG_09072 Loa loa LOAG_09072 N 0.000
MDOA004921 Musca domestica MDOA004921 N 0.000
nOo.2.0.1.g06577 Onchocerca ochengi nOo.2.0.1.g06577 N 0.000
PEQ_0000587201 Parascaris equorum PEQ_0000587201 N 0.000
PXEA_0001865101 Protopolystoma xenopodis PXEA_0001865101 N 0.000
PXEA_0002437401 Protopolystoma xenopodis PXEA_0002437401 N 0.000
Sjc_0082940 Schistosoma japonicum Sjc_0082940 N 0.000
SPER_0000032601 Spirometra erinaceieuropaei SPER_0000032601 N 0.000
SPER_0001686401 Spirometra erinaceieuropaei SPER_0001686401 N 0.000
SPER_0003607601 Spirometra erinaceieuropaei SPER_0003607601 N 0.000
SSLN_0001114201 Schistocephalus solidus SSLN_0001114201 N 0.000
pax6.L Xenopus laevis XB-GENE-865046 I 0.000