CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_kg.C_scaffold_16000108
(
Phytophthora capsici
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
fgenesh1_kg.C_scaffold_16000108
T230849_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_kg.C_scaffold_16000108
Homeodomain
1
63
MKQLATIIEEYEKNPRPSVTRLEELQKVLNQDDHSDEYAASTLGVTKQQIKTWFSNRRAKERL
Links
Other
Homeodomain
family TFs
Other
Phytophthora capsici
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMU15026520
Schmidtea mediterranea
SMU15026520
N
0.648
SSLN_0001114201
Schistocephalus solidus
SSLN_0001114201
N
0.632
MDOA004921
Musca domestica
MDOA004921
N
0.622
ECPE_0000273401
Echinostoma caproni
ECPE_0000273401
N
0.622
PXEA_0001865101
Protopolystoma xenopodis
PXEA_0001865101
N
0.622
SPER_0000032601
Spirometra erinaceieuropaei
SPER_0000032601
N
0.617
CRE03357
Caenorhabditis remanei
CRE03357
N
0.613
PXEA_0002437401
Protopolystoma xenopodis
PXEA_0002437401
N
0.613
SPER_0001686401
Spirometra erinaceieuropaei
SPER_0001686401
N
0.613
PEQ_0000587201
Parascaris equorum
PEQ_0000587201
N
0.612
pax6.L
Xenopus laevis
XB-GENE-865046
I
0.611
ADIR004612
Anopheles dirus
ADIR004612
N
0.606
AEPI000661
Anopheles epiroticus
AEPI000661
N
0.606
ASIS006297
Anopheles sinensis
ASIS006297
N
0.606
nOo.2.0.1.g06577
Onchocerca ochengi
nOo.2.0.1.g06577
N
0.606