Bra006257 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra006257 T292544_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC073
M07221_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
SND2_col_a 		0.923 0.596
NAC073
M07222_2.00 		Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND2_colamp_a 		0.923 0.596
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.880 0.500
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.880 0.500
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra006257.1-P NAC/NAM 65 202

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005677 Calypte anna Aan_R005677 I 0.000
Afo_R004508 Aptenodytes forsteri Afo_R004508 I 0.000
Brh_R010146 Buceros rhinoceros Brh_R010146 I 0.000
JDP2 Anolis carolinensis ENSACAG00000016944 I 0.000
ENSAMEG00000018337 Ailuropoda melanoleuca ENSAMEG00000018337 I 0.000
ENSAMXG00000013804 Astyanax mexicanus ENSAMXG00000013804 I 0.000
ENSAMXG00000014502 Astyanax mexicanus ENSAMXG00000014502 I 0.000
ENSAPLG00000011380 Anas platyrhynchos ENSAPLG00000011380 I 0.000
JDP2 Bos taurus ENSBTAG00000009451 I 0.000
JDP2 Canis familiaris ENSCAFG00000017042 I 0.000
ATF3 Callithrix jacchus ENSCJAG00000015735 I 0.000
JDP2 Callithrix jacchus ENSCJAG00000020645 I 0.000
ENSCPOG00000006636 Cavia porcellus ENSCPOG00000006636 I 0.000
ENSCSAG00000012122 Chlorocebus sabaeus ENSCSAG00000012122 I 0.000
jdp2b Danio rerio ENSDARG00000020133 I 0.000
jdp2a Danio rerio ENSDARG00000040137 I 0.000
JDP2 Dasypus novemcinctus ENSDNOG00000033141 I 0.000
ENSDNOG00000044236 Dasypus novemcinctus ENSDNOG00000044236 I 0.000
ENSDORG00000012888 Dipodomys ordii ENSDORG00000012888 I 0.000
JDP2 Equus caballus ENSECAG00000014862 I 0.000
ENSFALG00000006358 Ficedula albicollis ENSFALG00000006358 I 0.000
JDP2 Felis catus ENSFCAG00000029464 I 0.000
JDP2 Homo sapiens ENSG00000140044 D 0.000
ATF3 Homo sapiens ENSG00000162772 D 0.000
jdp2a Gasterosteus aculeatus ENSGACG00000007611 I 0.000
jdp2b Gasterosteus aculeatus ENSGACG00000010513 I 0.000
JDP2 Gallus gallus ENSGALG00000010322 I 0.000
JDP2 Gorilla gorilla ENSGGOG00000010752 I 0.000
ENSGMOG00000011063 Gadus morhua ENSGMOG00000011063 I 0.000
ENSLACG00000001315 Latimeria chalumnae ENSLACG00000001315 I 0.000
ENSLACG00000018083 Latimeria chalumnae ENSLACG00000018083 I 0.000
JDP2 Loxodonta africana ENSLAFG00000025757 I 0.000
ENSLOCG00000010526 Lepisosteus oculatus ENSLOCG00000010526 I 0.000
ENSMEUG00000011212 Macropus eugenii ENSMEUG00000011212 I 0.000
JDP2 Meleagris gallopavo ENSMGAG00000012755 I 0.000
ENSMICG00000016031 Microcebus murinus ENSMICG00000016031 I 0.000
ENSMLUG00000002256 Myotis lucifugus ENSMLUG00000002256 I 0.000
ATF3 Macaca mulatta ENSMMUG00000012185 I 0.000
ENSMMUP00000003747 Macaca fascicularis ENSMMUP00000003747 I 0.000
JDP2 Monodelphis domestica ENSMODG00000005909 I 0.000
ENSMPUG00000009147 Mustela putorius furo ENSMPUG00000009147 I 0.000
Jdp2 Mus musculus ENSMUSG00000034271 D 0.000
ENSNLEG00000016475 Nomascus leucogenys ENSNLEG00000016475 I 0.000
ENSOARG00000001796 Ovis aries ENSOARG00000001796 I 0.000
JDP2 Oryctolagus cuniculus ENSOCUG00000008466 I 0.000
JDP2 Otolemur garnettii ENSOGAG00000024796 I 0.000
ENSONIG00000015268 Oreochromis niloticus ENSONIG00000015268 I 0.000
ENSONIG00000020186 Oreochromis niloticus ENSONIG00000020186 I 0.000
JDP2 Ochotona princeps ENSOPRG00000012032 I 0.000
jdp2a Oryzias latipes ENSORLG00000016515 I 0.000
jdp2b Oryzias latipes ENSORLG00000017506 I 0.000
ENSP00000267569-D1 Bos grunniens ENSP00000267569-D1 I 0.000
ENSPANG00000019986 Papio anubis ENSPANG00000019986 I 0.000
ENSPFOG00000007886 Poecilia formosa ENSPFOG00000007886 I 0.000
ENSPFOG00000007903 Poecilia formosa ENSPFOG00000007903 I 0.000
ENSPFOG00000015014 Poecilia formosa ENSPFOG00000015014 I 0.000
ENSPPYG00000006004 Pongo abelii ENSPPYG00000006004 I 0.000
ENSPSIG00000017647 Pelodiscus sinensis ENSPSIG00000017647 I 0.000
JDP2 Pan troglodytes ENSPTRG00000006555 I 0.000
JDP2 Pteropus vampyrus ENSPVAG00000000672 I 0.000
Jdp2 Rattus norvegicus ENSRNOG00000008224 D 0.000
ENSSHAG00000017391 Sarcophilus harrisii ENSSHAG00000017391 I 0.000
ATF3 Sus scrofa ENSSSCG00000015595 I 0.000
ENSSTOG00000026831 Ictidomys tridecemlineatus ENSSTOG00000026831 I 0.000
ENSTBEG00000014483 Tupaia belangeri ENSTBEG00000014483 I 0.000
JDP2 Taeniopygia guttata ENSTGUG00000012219 I 0.000
ENSTNIG00000016355 Tetraodon nigroviridis ENSTNIG00000016355 I 0.000
jdp2a Tetraodon nigroviridis ENSTNIG00000017406 I 0.000
jdp2b Takifugu rubripes ENSTRUG00000010344 I 0.000
jdp2a Takifugu rubripes ENSTRUG00000018323 I 0.000
ENSVPAG00000003090 Vicugna pacos ENSVPAG00000003090 I 0.000
ENSXMAG00000004013 Xiphophorus maculatus ENSXMAG00000004013 I 0.000
ENSXMAG00000014805 Xiphophorus maculatus ENSXMAG00000014805 I 0.000
Gfo_R012906 Geospiza fortis Gfo_R012906 I 0.000
Myotis_brandtii_JDP2_10012947 Myotis brandtii Myotis_brandtii_JDP2_10012947 I 0.000
Ogr08030 Ophisaurus gracilis Ogr08030 I 0.000
Pvit_01216 Pogona vitticeps Pvit_01216 I 0.000