Bra027024 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra027024 T292632_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC007
M07164_2.00 		Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA		 Dap-seq
OMalley et al.(2016)
VND4_colamp_a 		0.927 0.909
NAC007
M07165_2.00 		Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA		 Dap-seq
OMalley et al.(2016)
VND4_col 		0.927 0.909
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra027024.1-P NAC/NAM 1 125

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla021437 Citrullus lanatus Cla021437 I 0.000
Cucsa.259560 Cucumis sativus Cucsa.259560 I 0.000
Eucgr.D02645 Eucalyptus grandis Eucgr.D02645 I 0.000
Eucgr.I02464 Eucalyptus grandis Eucgr.I02464 I 0.000
F775_30991 Aegilops tauschii F775_30991 I 0.000
GSMUA_Achr1G16280_001 Musa acuminata GSMUA_Achr1G16280_001 I 0.000
GSMUA_Achr1G18670_001 Musa acuminata GSMUA_Achr1G18670_001 I 0.000
LPERR09G05860 Leersia perrieri LPERR09G05860 I 0.000
LPERR09G13180 Leersia perrieri LPERR09G13180 I 0.000
MLOC_69710 Hordeum vulgare MLOC_69710 I 0.000
OB09G23870 Oryza brachyantha OB09G23870 I 0.000
OBART02G26000 Oryza barthii OBART02G26000 I 0.000
OLONG_017897 Oryza longistaminata OLONG_017897 I 0.000
OMERI09G12780 Oryza meridionalis OMERI09G12780 I 0.000
OPUNC09G15600 Oryza punctata OPUNC09G15600 I 0.000
OS04G0541700 Oryza sativa OS04G0541700 I 0.000
HOX6 Oryza sativa OS09G0528200 D 0.000
Pavir.J33909 Panicum virgatum Pavir.J33909 I 0.000
Pavir.J34132 Panicum virgatum Pavir.J34132 I 0.000
SapurV1A.0617s0090 Salix purpurea SapurV1A.0617s0090 I 0.000
SapurV1A.2485s0010 Salix purpurea SapurV1A.2485s0010 I 0.000
Traes_2AL_BFB0C6D4C Triticum aestivum Traes_2AL_BFB0C6D4C I 0.000
Traes_5DL_96F9EED93 Triticum aestivum Traes_5DL_96F9EED93 I 0.000
TRIUR3_11780 Triticum urartu TRIUR3_11780 I 0.000
TRIUR3_22395 Triticum urartu TRIUR3_22395 I 0.000