Bra027024 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra027024 T292632_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC007
M07164_2.00 		Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA		 Dap-seq
OMalley et al.(2016)
VND4_colamp_a 		0.927 0.909
NAC007
M07165_2.00 		Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA		 Dap-seq
OMalley et al.(2016)
VND4_col 		0.927 0.909
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra027024.1-P NAC/NAM 1 125

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.1670s0031 Capsella grandiflora Cagra.1670s0031 I 0.942
Carubv10022351m.g Capsella rubella Carubv10022351m.g I 0.942
VND5 Arabidopsis lyrata fgenesh2_kg.2__212__AT1G62700.1 I 0.939
Bostr.22157s0066 Boechera stricta Bostr.22157s0066 I 0.939
NAC007 Arabidopsis thaliana AT1G12260 D 0.927
Bo8g062650 Brassica oleracea Bo8g062650 I 0.927
Bra016783 Brassica rapa Bra016783 I 0.927
VND4 Arabidopsis lyrata fgenesh2_kg.1__1330__AT1G12260.1 I 0.927
Bostr.13671s0233 Boechera stricta Bostr.13671s0233 I 0.927
Cagra.0568s0135 Capsella grandiflora Cagra.0568s0135 I 0.927
Carubv10009366m.g Capsella rubella Carubv10009366m.g I 0.927
Thhalv10007823m.g Eutrema salsugineum Thhalv10007823m.g I 0.927
evm.TU.supercontig_29.118 Carica papaya evm.TU.supercontig_29.118 I 0.922
Bo8g108300 Brassica oleracea Bo8g108300 I 0.921
Bra026981 Brassica rapa Bra026981 I 0.921
LjSGA_013013.1 Lotus japonicus LjSGA_013013.1 I 0.916
Bo5g017120 Brassica oleracea Bo5g017120 I 0.915
Bra019750 Brassica rapa Bra019750 I 0.914
MTR_4g101680 Medicago truncatula MTR_4g101680 I 0.907
PRUPE_ppa015786mg Prunus persica PRUPE_ppa015786mg I 0.905
Pm023559 Prunus mume Pm023559 I 0.905
Cucsa.302120 Cucumis sativus Cucsa.302120 I 0.904
Cucsa.320590 Cucumis sativus Cucsa.320590 I 0.904
AMTR_s00011p00251570 Amborella trichopoda AMTR_s00011p00251570 I 0.901
GLYMA05G04250 Glycine max GLYMA05G04250 I 0.901
GLYMA17G14700 Glycine max GLYMA17G14700 I 0.901
Ciclev10024218m.g Citrus clementina Ciclev10024218m.g I 0.901
orange1.1g020354m.g Citrus sinensis orange1.1g020354m.g I 0.901
Si010504m.g Setaria italica Si010504m.g I 0.900
Pavir.Gb00744 Panicum virgatum Pavir.Gb00744 I 0.900
Pavir.J07126 Panicum virgatum Pavir.J07126 I 0.900
Ca_02365 Cicer arietinum Ca_02365 I 0.898
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I 0.897
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I 0.897
TCM_016035 Theobroma cacao TCM_016035 I 0.897
28200.m000189 Ricinus communis 28200.m000189 I 0.897
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I 0.897
PK23416.1 Cannabis sativa PK23416.1 I 0.897
BGIOSGA014649 Oryza indica BGIOSGA014649 I 0.896
LPERR04G16200 Leersia perrieri LPERR04G16200 I 0.896
OB04G27030 Oryza brachyantha OB04G27030 I 0.896
OBART04G20020 Oryza barthii OBART04G20020 I 0.896
OGLUM04G19900 Oryza glumaepatula OGLUM04G19900 I 0.896
OMERI03G30800 Oryza meridionalis OMERI03G30800 I 0.896
ONIVA04G18230 Oryza nivara ONIVA04G18230 I 0.896
OPUNC04G17680 Oryza punctata OPUNC04G17680 I 0.896
ORGLA04G0171200 Oryza glaberrima ORGLA04G0171200 I 0.896
ORUFI04G21580 Oryza rufipogon ORUFI04G21580 I 0.896
OS04G0536500 Oryza sativa OS04G0536500 I 0.896
MTR_4g036030 Medicago truncatula MTR_4g036030 I 0.893
MTR_5g012080 Medicago truncatula MTR_5g012080 I 0.893
Lus10024601.g Linum usitatissimum Lus10024601.g I 0.892
Lus10032238.g Linum usitatissimum Lus10032238.g I 0.892
SapurV1A.0634s0120 Salix purpurea SapurV1A.0634s0120 I 0.892
VIT_02s0154g00020 Vitis vinifera VIT_02s0154g00020 I 0.891
cassava46384.m1 Manihot esculenta cassava46384.m1 I 0.890
GLYMA11G03340 Glycine max GLYMA11G03340 I 0.889
mgf020336m Mimulus guttatus mgf020336m I 0.889
Ca_08693 Cicer arietinum Ca_08693 I 0.887
gene32254-v1.0-hybrid Fragaria vesca gene32254-v1.0-hybrid I 0.886
Gorai.003G169000 Gossypium raimondii Gorai.003G169000 I 0.886
Gorai.008G236400 Gossypium raimondii Gorai.008G236400 I 0.885
Lus10031142.g Linum usitatissimum Lus10031142.g I 0.885
Lus10031721.g Linum usitatissimum Lus10031721.g I 0.885
NAC026 Arabidopsis thaliana AT1G62700 I 0.883
Thhalv10023502m.g Eutrema salsugineum Thhalv10023502m.g I 0.883
MDP0000131126 Malus domestica MDP0000131126 I 0.882
MDP0000221977 Malus domestica MDP0000221977 I 0.882
LjSGA_069569.1 Lotus japonicus LjSGA_069569.1 I 0.882
POPTR_0012s14660 Populus trichocarpa POPTR_0012s14660 I 0.881
PK28510.1 Cannabis sativa PK28510.1 I 0.881
PRUPE_ppa020139mg Prunus persica PRUPE_ppa020139mg I 0.880
VIT_16s0022g00690 Vitis vinifera VIT_16s0022g00690 I 0.880
Pm019488 Prunus mume Pm019488 I 0.880
Pm019490 Prunus mume Pm019490 I 0.880
MDP0000246470 Malus domestica MDP0000246470 I 0.880
MDP0000254112 Malus domestica MDP0000254112 I 0.880
POPTR_0015s14770 Populus trichocarpa POPTR_0015s14770 I 0.879
30147.m014211 Ricinus communis 30147.m014211 I 0.879
gene21248-v1.0-hybrid Fragaria vesca gene21248-v1.0-hybrid I 0.879
SapurV1A.0129s0210 Salix purpurea SapurV1A.0129s0210 I 0.879
Cla005768 Citrullus lanatus Cla005768 I 0.878
PRUPE_ppa022264mg Prunus persica PRUPE_ppa022264mg I 0.877
Pm026735 Prunus mume Pm026735 I 0.877
MDP0000136180 Malus domestica MDP0000136180 I 0.877
MDP0000176447 Malus domestica MDP0000176447 I 0.877
MDP0000298965 Malus domestica MDP0000298965 I 0.877
MDP0000299959 Malus domestica MDP0000299959 I 0.877
SapurV1A.0166s0460 Salix purpurea SapurV1A.0166s0460 I 0.877
SapurV1A.3982s0010 Salix purpurea SapurV1A.3982s0010 I 0.877
cassava47039.m1 Manihot esculenta cassava47039.m1 I 0.876
TCM_014939 Theobroma cacao TCM_014939 I 0.875
Ciclev10006988m.g Citrus clementina Ciclev10006988m.g I 0.875
Eucgr.A02887 Eucalyptus grandis Eucgr.A02887 I 0.875
Gorai.001G048200 Gossypium raimondii Gorai.001G048200 I 0.875
orange1.1g018596m.g Citrus sinensis orange1.1g018596m.g I 0.875
Bra039915 Brassica rapa Bra039915 I 0.874
GRMZM2G178998 Zea mays GRMZM2G178998 I 0.874
PGSC0003DMG400021576 Solanum tuberosum PGSC0003DMG400021576 I 0.874
Solyc06g034340.1 Solanum lycopersicum Solyc06g034340.1 I 0.874
Cla006372 Citrullus lanatus Cla006372 I 0.873
Cucsa.251620 Cucumis sativus Cucsa.251620 I 0.873
Bostr.18351s0273 Boechera stricta Bostr.18351s0273 I 0.872
gene14869-v1.0-hybrid Fragaria vesca gene14869-v1.0-hybrid I 0.872