Bra033308 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra033308 T292672_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC004
M07161_2.00 		Arabidopsis thaliana
CTTVYNYNRYAAGY
RCTTRYNRNRBAAG		 Dap-seq
OMalley et al.(2016)
ANAC004_col_a 		0.975 0.652
NAC004
M07162_2.00 		Arabidopsis thaliana
WVCTTVYNBNRYAAGYWWBNN
NNVWWRCTTRYNVNRBAAGBW		 Dap-seq
OMalley et al.(2016)
ANAC004_colamp_a 		0.975 0.652
NAC005
M07163_2.00 		Arabidopsis thaliana
WWNCTTVYNHHNYAAGTWW
WWACTTRNDDNRBAAGNWW		 Dap-seq
OMalley et al.(2016)
ANAC005_col_a 		0.957 0.635
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra033308.1-P NAC/NAM 5 139

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MAJ_07777 Metarhizium majus MAJ_07777 N
MAJ_08213 Metarhizium majus MAJ_08213 N
MAJ_08889 Metarhizium majus MAJ_08889 N
MAJ_10496 Metarhizium majus MAJ_10496 N
MANI_005377 Metarhizium anisopliae MANI_005377 N
MGU_10311 Metarhizium guizhouense MGU_10311 N
MGU_10777 Metarhizium guizhouense MGU_10777 N