CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G054252
(
Zea mays
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GRMZM2G054252
T293201_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G054252_P01
NAC/NAM
24
168
PPGFRFRPTDEELVVQYLRRKAIGVPLPAAVIPVFRDLYSRDPWDVVAVSAPDTRSEGEKYFFAVRPASGGKSSGAGTGSRAAAGGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFVPRRRKKTAALPSAALKTGWVMHEYRL
GRMZM2G054252_P02
NAC/NAM
24
169
PPGFRFRPTDEELVVQYLRRKAIGVPLPAAVIPVFRDLYSRDPWDVVAVSAPADTRSEGEKYFFAVRPASGGKSSGAGTGSRAAAGGRWKPSGKEKPVVLPRPCGGGSLLVGVKRAMTFVPRRRKKTAALPSAALKTGWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Zea mays
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA029063
Oryza indica
BGIOSGA029063
N
0.961
BGIOSGA031062
Oryza indica
BGIOSGA031062
N
0.968
BGIOSGA037778
Oryza indica
BGIOSGA037778
N
0.891
BRADI3G41470
Brachypodium distachyon
BRADI3G41470
N
0.983
BRADI4G02060
Brachypodium distachyon
BRADI4G02060
N
0.883
BRADI4G34800
Brachypodium distachyon
BRADI4G34800
N
0.974
Cagra.0925s0069
Capsella grandiflora
Cagra.0925s0069
N
0.871
Ca_22941
Cicer arietinum
Ca_22941
N
0.928
Eucgr.G01047
Eucalyptus grandis
Eucgr.G01047
N
0.888
Eucgr.G01053
Eucalyptus grandis
Eucgr.G01053
N
0.875
Eucgr.H00826
Eucalyptus grandis
Eucgr.H00826
N
0.883
gene01364-v1.0-hybrid
Fragaria vesca
gene01364-v1.0-hybrid
N
0.949
GRMZM2G054277
Zea mays
GRMZM2G054277
N
0.981
GRMZM2G100583
Zea mays
GRMZM2G100583
N
0.990
GRMZM2G114850
Zea mays
GRMZM2G114850
N
0.893
GRMZM2G179049
Zea mays
GRMZM2G179049
N
0.973
LPERR08G18520
Leersia perrieri
LPERR08G18520
N
0.983
LPERR09G12100
Leersia perrieri
LPERR09G12100
N
0.968
LPERR12G15510
Leersia perrieri
LPERR12G15510
N
0.896
Lus10012927.g
Linum usitatissimum
Lus10012927.g
N
0.899
Lus10032004.g
Linum usitatissimum
Lus10032004.g
N
0.901
Lus10034999.g
Linum usitatissimum
Lus10034999.g
N
0.899
mgf006124m
Mimulus guttatus
mgf006124m
N
0.895
mgf019352m
Mimulus guttatus
mgf019352m
N
0.906
MLOC_55957
Hordeum vulgare
MLOC_55957
N
0.926
OB09G22520
Oryza brachyantha
OB09G22520
N
0.935
OB12G25170
Oryza brachyantha
OB12G25170
N
0.897
OBART08G21800
Oryza barthii
OBART08G21800
N
0.949
OBART09G15890
Oryza barthii
OBART09G15890
N
0.968
OBART12G18490
Oryza barthii
OBART12G18490
N
0.890
OGLUM08G23090
Oryza glumaepatula
OGLUM08G23090
N
0.959
OGLUM09G16460
Oryza glumaepatula
OGLUM09G16460
N
0.968
OGLUM12G20140
Oryza glumaepatula
OGLUM12G20140
N
0.890
OLONG_020119
Oryza longistaminata
OLONG_020119
N
0.946
OMERI06G13840
Oryza meridionalis
OMERI06G13840
N
0.984
OMERI09G11810
Oryza meridionalis
OMERI09G11810
N
0.966
OMERI12G13180
Oryza meridionalis
OMERI12G13180
N
0.897
ONIVA08G24840
Oryza nivara
ONIVA08G24840
N
0.960
ONIVA09G17010
Oryza nivara
ONIVA09G17010
N
0.968
ONIVA12G17390
Oryza nivara
ONIVA12G17390
N
0.885
OPUNC08G19870
Oryza punctata
OPUNC08G19870
N
0.952
OPUNC09G14320
Oryza punctata
OPUNC09G14320
N
0.961
OPUNC12G16690
Oryza punctata
OPUNC12G16690
N
0.897
ORGLA08G0227400
Oryza glaberrima
ORGLA08G0227400
N
0.952
ORGLA09G0123200
Oryza glaberrima
ORGLA09G0123200
N
0.968
ORGLA12G0157500
Oryza glaberrima
ORGLA12G0157500
N
0.890
ORUFI08G24230
Oryza rufipogon
ORUFI08G24230
N
0.957
ORUFI09G17170
Oryza rufipogon
ORUFI09G17170
N
0.967
ORUFI12G20640
Oryza rufipogon
ORUFI12G20640
N
0.890
OS08G0535800
Oryza sativa
OS08G0535800
N
0.960
OS09G0509100
Oryza sativa
OS09G0509100
N
0.967
OS12G0610600
Oryza sativa
OS12G0610600
N
0.890
Pavir.Fb00689
Panicum virgatum
Pavir.Fb00689
N
0.888
Pavir.J04931
Panicum virgatum
Pavir.J04931
N
0.993
Pavir.J11699
Panicum virgatum
Pavir.J11699
N
0.966
Pavir.J23083
Panicum virgatum
Pavir.J23083
N
0.966
Sb02g029460
Sorghum bicolor
Sb02g029460
N
0.924
Sb10g022130
Sorghum bicolor
Sb10g022130
N
0.874
SELMODRAFT_69130
Selaginella moellendorffii
SELMODRAFT_69130
N
0.943
SELMODRAFT_69131
Selaginella moellendorffii
SELMODRAFT_69131
N
0.943
Si014408m.g
Setaria italica
Si014408m.g
N
0.994
Si030942m.g
Setaria italica
Si030942m.g
N
0.972
Solyc07g066330.2
Solanum lycopersicum
Solyc07g066330.2
N
0.915
Traes_5BL_456C3408A
Triticum aestivum
Traes_5BL_456C3408A
N
0.928
Traes_5DL_36AE1EF2B
Triticum aestivum
Traes_5DL_36AE1EF2B
N
0.939