CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0925s0069
(
Capsella grandiflora
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cagra.0925s0069
T297373_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0925s0069.1.p
NAC/NAM
52
179
PPGYKFVPNDEELLCHYLKPFSQGDKCSLLSVPIHYVNIYESNPQQLSEKYEKGNEKEWFFISERTKTGKGGRNTKRGSNGGYWNSTVAAKKIYAGNGMIGYKSALEYYVGKKPKGVKGDWLMHEYWF
Links
Other
NAC/NAM
family TFs
Other
Capsella grandiflora
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.20505s0101
Boechera stricta
Bostr.20505s0101
N
0.997
anac064
Arabidopsis lyrata
fgenesh2_kg.5__2087__AT3G56530.1
N
0.995
anac064
Arabidopsis thaliana
AT3G56530
N
0.989
anac063
Arabidopsis thaliana
AT3G55210
N
0.959
gene01364-v1.0-hybrid
Fragaria vesca
gene01364-v1.0-hybrid
N
0.924
Al_scaffold_0005_1550
Arabidopsis lyrata
Al_scaffold_0005_1550
N
0.917
Lus10025078.g
Linum usitatissimum
Lus10025078.g
N
0.899
Lus10024006.g
Linum usitatissimum
Lus10024006.g
N
0.896
LPERR08G18520
Leersia perrieri
LPERR08G18520
N
0.894
GRMZM2G054252
Zea mays
GRMZM2G054252
N
0.871