Solyc04g005610.2 (Solanum lycopersicum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Solyc04g005610.2 T295842_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC029
M00973_2.00 		Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN		 PBM
Lindemose et al.(2014)
NAP 		0.928 0.875
NAC029
M02369_2.00 		Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN		 PBM
Weirauch et al.(2014)
pTH8397 		0.928 0.875
NAC029
M07180_2.00 		Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN		 Dap-seq
OMalley et al.(2016)
NAP_colamp_a 		0.928 0.875
NAC029
M07181_2.00 		Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW		 Dap-seq
OMalley et al.(2016)
NAP_col_v3a 		0.928 0.875
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc04g005610.2.1 NAC/NAM 11 135

Links

Other NAC/NAM family TFs
Other Solanum lycopersicum TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_029500 Albugo laibachii ALNC14_029500 N 0.000
estExt_fgenesh1_kg.C_2070034 Phytophthora capsici estExt_fgenesh1_kg.C_2070034 N 0.000
estExt_fgenesh1_pm.C_680840001 Phytophthora capsici estExt_fgenesh1_pm.C_680840001 N 0.000
estExt_Genewise1Plus.C_180162 Phytophthora capsici estExt_Genewise1Plus.C_180162 I 0.000
estExt_Genewise1Plus.C_2050016 Phytophthora capsici estExt_Genewise1Plus.C_2050016 I 0.000
F443_00625 Phytophthora parasitica F443_00625 N 0.000
F443_20671 Phytophthora parasitica F443_20671 I 0.000
F443_20702 Phytophthora parasitica F443_20702 I 0.000
fgenesh1_kg.C_scaffold_15000102 Phytophthora capsici fgenesh1_kg.C_scaffold_15000102 I 0.000
fgenesh_scip_prom.28083.11537 Phytophthora lateralis fgenesh_scip_prom.28083.11537 N 0.000
fgenesh_scip_prom.28083.3854 Phytophthora lateralis fgenesh_scip_prom.28083.3854 N 0.000
fgenesh_scip_prom.46568.7328 Phytophthora kernoviae fgenesh_scip_prom.46568.7328 N 0.000
fgenesh_scip_prom.46568.9767 Phytophthora kernoviae fgenesh_scip_prom.46568.9767 N 0.000
HpaG809807 Hyaloperonospora arabidopsidis HpaG809807 N 0.000
HpaG810857 Hyaloperonospora arabidopsidis HpaG810857 I 0.000
HpaG811464 Hyaloperonospora arabidopsidis HpaG811464 N 0.000
maker-pag1_scaffold_154-snap-gene-0.25 Pythium aphanidermatum maker-pag1_scaffold_154-snap-gene-0.25 N 0.000
maker-pag1_scaffold_154-snap-gene-0.26 Pythium aphanidermatum maker-pag1_scaffold_154-snap-gene-0.26 N 0.000
maker-pag1_scaffold_266-fgenesh-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_266-fgenesh-gene-0.3 N 0.000
maker-pag1_scaffold_266-snap-gene-0.11 Pythium aphanidermatum maker-pag1_scaffold_266-snap-gene-0.11 I 0.000
maker-pag1_scaffold_266-snap-gene-0.7 Pythium aphanidermatum maker-pag1_scaffold_266-snap-gene-0.7 N 0.000
maker-par_contig_2748-snap-gene-0.2 Pythium arrhenomanes maker-par_contig_2748-snap-gene-0.2 I 0.000
maker-par_contig_2799-snap-gene-0.1 Pythium arrhenomanes maker-par_contig_2799-snap-gene-0.1 N 0.000
maker-par_contig_3706-snap-gene-0.1 Pythium arrhenomanes maker-par_contig_3706-snap-gene-0.1 N 0.000
maker-par_contig_4085-snap-gene-0.0 Pythium arrhenomanes maker-par_contig_4085-snap-gene-0.0 N 0.000
maker-par_contig_631-snap-gene-0.2 Pythium arrhenomanes maker-par_contig_631-snap-gene-0.2 N 0.000
maker-pir_contig_435-fgenesh-gene-0.7 Pythium irregulare maker-pir_contig_435-fgenesh-gene-0.7 I 0.000
maker-pir_contig_516-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_516-fgenesh-gene-0.3 N 0.000
maker-pir_contig_516-fgenesh-gene-0.8 Pythium irregulare maker-pir_contig_516-fgenesh-gene-0.8 N 0.000
maker-pir_contig_524-fgenesh-gene-0.4 Pythium irregulare maker-pir_contig_524-fgenesh-gene-0.4 N 0.000
maker-pir_contig_524-snap-gene-0.9 Pythium irregulare maker-pir_contig_524-snap-gene-0.9 N 0.000
maker-pir_contig_548-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_548-fgenesh-gene-0.3 I 0.000
maker-piw_contig_1647-snap-gene-0.3 Pythium iwayamai maker-piw_contig_1647-snap-gene-0.3 N 0.000
maker-piw_contig_4506-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_4506-fgenesh-gene-0.0 N 0.000
maker-piw_contig_50-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_50-fgenesh-gene-0.1 I 0.000
maker-piw_contig_637-fgenesh-gene-0.5 Pythium iwayamai maker-piw_contig_637-fgenesh-gene-0.5 I 0.000
maker-piw_contig_637-snap-gene-0.12 Pythium iwayamai maker-piw_contig_637-snap-gene-0.12 N 0.000
maker-piw_contig_841-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_841-fgenesh-gene-0.2 N 0.000
maker-pve_contig_13-snap-gene-0.46 Pythium vexans maker-pve_contig_13-snap-gene-0.46 I 0.000
maker-pve_contig_364-fgenesh-gene-0.6 Pythium vexans maker-pve_contig_364-fgenesh-gene-0.6 N 0.000
maker-pve_contig_734-snap-gene-0.9 Pythium vexans maker-pve_contig_734-snap-gene-0.9 I 0.000
maker-pve_contig_871-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_871-fgenesh-gene-0.0 N 0.000
Phyra73320 Phytophthora ramorum Phyra73320 N 0.000
Phyra78879 Phytophthora ramorum Phyra78879 N 0.000
Phyra80922 Phytophthora ramorum Phyra80922 N 0.000
Phyra80925 Phytophthora ramorum Phyra80925 N 0.000
Physo132943 Phytophthora sojae Physo132943 I 0.000
Physo132945 Phytophthora sojae Physo132945 I 0.000
Physo132946 Phytophthora sojae Physo132946 I 0.000
Physo132965 Phytophthora sojae Physo132965 N 0.000
Physo138282 Phytophthora sojae Physo138282 N 0.000
PITG_10310 Phytophthora infestans PITG_10310 N 0.000
PITG_14400 Phytophthora infestans PITG_14400 I 0.000
PYU1_G002832 Pythium ultimum PYU1_G002832 N 0.000
PYU1_G002833 Pythium ultimum PYU1_G002833 I 0.000
PYU1_G002835 Pythium ultimum PYU1_G002835 I 0.000
PYU1_G002839 Pythium ultimum PYU1_G002839 N 0.000
PYU1_G002844 Pythium ultimum PYU1_G002844 N 0.000
PYU1_G002847 Pythium ultimum PYU1_G002847 N 0.000
PYU1_G002849 Pythium ultimum PYU1_G002849 I 0.000