CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_180162
(
Phytophthora capsici
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
estExt_Genewise1Plus.C_180162
T290831_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Phyra80938
M02333_2.00
Phytophthora ramorum
NNGWABCYWN
NWRGVTWCNN
PBM
Weirauch et al.(2014)
pTH7925
0.682
0.745
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_180162
Myb
35
81
GTPWTPEEHDRFLEAFERYPSGPWKAIAAHIGTRTTRQTMTHAQKYR
Links
Other
Myb/SANT
family TFs
Other
Phytophthora capsici
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PYU1_G002833
Pythium ultimum
PYU1_G002833
I
0.792
maker-pve_contig_13-snap-gene-0.46
Pythium vexans
maker-pve_contig_13-snap-gene-0.46
I
0.775
maker-pir_contig_435-fgenesh-gene-0.6
Pythium irregulare
maker-pir_contig_435-fgenesh-gene-0.6
I
0.760
maker-pag1_scaffold_266-snap-gene-0.11
Pythium aphanidermatum
maker-pag1_scaffold_266-snap-gene-0.11
I
0.757
PYU1_G002831
Pythium ultimum
PYU1_G002831
N
0.752
maker-pve_contig_734-snap-gene-0.9
Pythium vexans
maker-pve_contig_734-snap-gene-0.9
I
0.744
maker-pir_contig_548-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_548-fgenesh-gene-0.3
I
0.739
Phyra80925
Phytophthora ramorum
Phyra80925
N
0.736
F443_19686
Phytophthora parasitica
F443_19686
I
0.726
fgenesh_scip_prom.28083.1909
Phytophthora lateralis
fgenesh_scip_prom.28083.1909
I
0.726
Phyra87784
Phytophthora ramorum
Phyra87784
I
0.726
Phyra95260
Phytophthora ramorum
Phyra95260
I
0.726
PITG_18789
Phytophthora infestans
PITG_18789
I
0.726
estExt_fgenesh1_kg.C_3051400005
Phytophthora capsici
estExt_fgenesh1_kg.C_3051400005
I
0.726
Physo132945
Phytophthora sojae
Physo132945
I
0.723
HpaG810857
Hyaloperonospora arabidopsidis
HpaG810857
I
0.715
maker-pir_contig_435-fgenesh-gene-0.7
Pythium irregulare
maker-pir_contig_435-fgenesh-gene-0.7
I
0.712
maker-piw_contig_50-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_50-fgenesh-gene-0.1
I
0.712
PYU1_G002835
Pythium ultimum
PYU1_G002835
I
0.705
maker-pir_contig_548-snap-gene-0.6
Pythium irregulare
maker-pir_contig_548-snap-gene-0.6
I
0.704
PYU1_G002826
Pythium ultimum
PYU1_G002826
N
0.700
PYU1_G002832
Pythium ultimum
PYU1_G002832
N
0.697
maker-pve_contig_1017-fgenesh-gene-0.2
Pythium vexans
maker-pve_contig_1017-fgenesh-gene-0.2
I
0.696
maker-pir_contig_548-fgenesh-gene-0.4
Pythium irregulare
maker-pir_contig_548-fgenesh-gene-0.4
I
0.695
F443_20671
Phytophthora parasitica
F443_20671
I
0.692
maker-pir_contig_516-fgenesh-gene-0.8
Pythium irregulare
maker-pir_contig_516-fgenesh-gene-0.8
N
0.692
PITG_14400
Phytophthora infestans
PITG_14400
I
0.692
fgenesh1_kg.C_scaffold_15000102
Phytophthora capsici
fgenesh1_kg.C_scaffold_15000102
I
0.692
maker-par_contig_8416-snap-gene-0.0
Pythium arrhenomanes
maker-par_contig_8416-snap-gene-0.0
N
0.689
Physo132943
Phytophthora sojae
Physo132943
I
0.684
Physo132946
Phytophthora sojae
Physo132946
I
0.684
F443_20703
Phytophthora parasitica
F443_20703
I
0.682
fgenesh_scip_prom.28083.5526
Phytophthora lateralis
fgenesh_scip_prom.28083.5526
I
0.682
Phyra80938
Phytophthora ramorum
Phyra80938
D
0.682
Physo132941
Phytophthora sojae
Physo132941
I
0.682
estExt_fgenesh1_kg.C_2050026
Phytophthora capsici
estExt_fgenesh1_kg.C_2050026
I
0.682
fgenesh_scip_prom.46568.9768
Phytophthora kernoviae
fgenesh_scip_prom.46568.9768
N
0.681
Phyra80922
Phytophthora ramorum
Phyra80922
N
0.681
Physo132965
Phytophthora sojae
Physo132965
N
0.681
ALNC14_029500
Albugo laibachii
ALNC14_029500
N
0.680
fgenesh_scip_prom.46568.9767
Phytophthora kernoviae
fgenesh_scip_prom.46568.9767
N
0.676
maker-piw_contig_637-fgenesh-gene-0.5
Pythium iwayamai
maker-piw_contig_637-fgenesh-gene-0.5
I
0.674
PYU1_G002849
Pythium ultimum
PYU1_G002849
I
0.674
F443_08983
Phytophthora parasitica
F443_08983
I
0.670
F443_03239
Phytophthora parasitica
F443_03239
N
0.669
F443_20702
Phytophthora parasitica
F443_20702
I
0.662
estExt_Genewise1Plus.C_2050016
Phytophthora capsici
estExt_Genewise1Plus.C_2050016
I
0.662