Phyra80938 (Phytophthora ramorum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Phyra80938 T277890_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra80938
M02333_2.00		 Phytophthora ramorum
NNGWABCYWN
NWRGVTWCNN		 PBM
Weirauch et al.(2014)
pTH7925		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.661 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02333_2.00 Myb 51 97

DNA Binding Domains

Protein ID Domain From To Sequence
Phyra80938 Myb 52 98

Links

Other Myb/SANT family TFs
Other Phytophthora ramorum TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh_scip_prom.28083.5526 Phytophthora lateralis fgenesh_scip_prom.28083.5526 I 0.909
Physo132941 Phytophthora sojae Physo132941 I 0.909
estExt_fgenesh1_kg.C_2050026 Phytophthora capsici estExt_fgenesh1_kg.C_2050026 I 0.909
F443_20703 Phytophthora parasitica F443_20703 I 0.875
Physo132945 Phytophthora sojae Physo132945 I 0.766
maker-pve_contig_13-snap-gene-0.46 Pythium vexans maker-pve_contig_13-snap-gene-0.46 I 0.764
maker-pve_contig_734-snap-gene-0.9 Pythium vexans maker-pve_contig_734-snap-gene-0.9 I 0.731
Physo132943 Phytophthora sojae Physo132943 I 0.727
Physo132946 Phytophthora sojae Physo132946 I 0.727
estExt_Genewise1Plus.C_2050016 Phytophthora capsici estExt_Genewise1Plus.C_2050016 I 0.723
F443_20702 Phytophthora parasitica F443_20702 I 0.720
PK06453.1 Cannabis sativa PK06453.1 I 0.711
maker-pag1_scaffold_266-snap-gene-0.11 Pythium aphanidermatum maker-pag1_scaffold_266-snap-gene-0.11 I 0.710
maker-piw_contig_50-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_50-fgenesh-gene-0.1 I 0.702
maker-pir_contig_548-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_548-fgenesh-gene-0.3 I 0.696
maker-pag1_scaffold_151-fgenesh-gene-0.1 Pythium aphanidermatum maker-pag1_scaffold_151-fgenesh-gene-0.1 I 0.693
maker-pve_contig_1017-fgenesh-gene-0.2 Pythium vexans maker-pve_contig_1017-fgenesh-gene-0.2 I 0.691
maker-par_contig_2748-snap-gene-0.2 Pythium arrhenomanes maker-par_contig_2748-snap-gene-0.2 I 0.689
maker-pir_contig_435-fgenesh-gene-0.7 Pythium irregulare maker-pir_contig_435-fgenesh-gene-0.7 I 0.686
maker-par_contig_1627-fgenesh-gene-0.1 Pythium arrhenomanes maker-par_contig_1627-fgenesh-gene-0.1 I 0.684
maker-par_contig_1627-snap-gene-0.2 Pythium arrhenomanes maker-par_contig_1627-snap-gene-0.2 I 0.684
fgenesh_scip_prom.46568.8840 Phytophthora kernoviae fgenesh_scip_prom.46568.8840 I 0.682
estExt_Genewise1Plus.C_180162 Phytophthora capsici estExt_Genewise1Plus.C_180162 I 0.682
HpaG810857 Hyaloperonospora arabidopsidis HpaG810857 I 0.678
maker-pir_contig_548-snap-gene-0.6 Pythium irregulare maker-pir_contig_548-snap-gene-0.6 I 0.677
maker-pir_contig_516-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_516-fgenesh-gene-0.2 I 0.676
maker-pir_contig_435-fgenesh-gene-0.6 Pythium irregulare maker-pir_contig_435-fgenesh-gene-0.6 I 0.674
F443_19686 Phytophthora parasitica F443_19686 I 0.673
fgenesh_scip_prom.28083.1909 Phytophthora lateralis fgenesh_scip_prom.28083.1909 I 0.673
Phyra87784 Phytophthora ramorum Phyra87784 I 0.673
Phyra95260 Phytophthora ramorum Phyra95260 I 0.673
PITG_18789 Phytophthora infestans PITG_18789 I 0.673
estExt_fgenesh1_kg.C_3051400005 Phytophthora capsici estExt_fgenesh1_kg.C_3051400005 I 0.673
F443_20671 Phytophthora parasitica F443_20671 I 0.671
maker-piw_contig_637-fgenesh-gene-0.5 Pythium iwayamai maker-piw_contig_637-fgenesh-gene-0.5 I 0.671
PITG_14400 Phytophthora infestans PITG_14400 I 0.671
PYU1_G002849 Pythium ultimum PYU1_G002849 I 0.671
fgenesh1_kg.C_scaffold_15000102 Phytophthora capsici fgenesh1_kg.C_scaffold_15000102 I 0.671
PYU1_G002833 Pythium ultimum PYU1_G002833 I 0.666
F443_08983 Phytophthora parasitica F443_08983 I 0.665
maker-par_contig_1566-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_1566-fgenesh-gene-0.0 I 0.664
maker-pir_contig_548-fgenesh-gene-0.4 Pythium irregulare maker-pir_contig_548-fgenesh-gene-0.4 I 0.664
PYU1_G002835 Pythium ultimum PYU1_G002835 I 0.661