CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc11g068620.1
(
Solanum lycopersicum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Solyc11g068620.1
T295903_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc11g068620.1.1
NAC/NAM
6
136
SPGFRFYPTEEELISFYLHKKLEGKKPELDRVIPVVTIYDFDPWHLPKFHGELCMGDREQWFFFVPRQEREARGGRPCRTTNCGYWKATGSPSYVYSSNNKVIGVKKSMVFYKGKAPTGKKTKWKMNEYRA
Links
Other
NAC/NAM
family TFs
Other
Solanum lycopersicum
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30147.m014242
Ricinus communis
30147.m014242
I
0.000
AT5G61470
Arabidopsis thaliana
AT5G61470
N
0.000
Bostr.26833s0090
Boechera stricta
Bostr.26833s0090
N
0.000
Bra012953
Brassica rapa
Bra012953
N
0.000
cassava21316.m1
Manihot esculenta
cassava21316.m1
I
0.000
cassava47027.m1
Manihot esculenta
cassava47027.m1
N
0.000
Cla001400
Citrullus lanatus
Cla001400
I
0.000
Lus10038929.g
Linum usitatissimum
Lus10038929.g
N
0.000
POPTR_0001s00800
Populus trichocarpa
POPTR_0001s00800
I
0.000
SapurV1A.1544s0070
Salix purpurea
SapurV1A.1544s0070
I
0.000
SapurV1A.1944s0060
Salix purpurea
SapurV1A.1944s0060
I
0.000
Thhalv10005323m.g
Eutrema salsugineum
Thhalv10005323m.g
N
0.000