cassava47027.m1 (Manihot esculenta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 cassava47027.m1 T137888_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava47027.m1 C2H2 ZF 194 216
cassava47027.m1 C2H2 ZF 246 268

Links

Other C2H2 ZF family TFs
Other Manihot esculenta TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava21316.m1 Manihot esculenta cassava21316.m1 I 0.787
SapurV1A.1544s0070 Salix purpurea SapurV1A.1544s0070 I 0.787
SapurV1A.1944s0060 Salix purpurea SapurV1A.1944s0060 I 0.787
POPTR_0001s00800 Populus trichocarpa POPTR_0001s00800 I 0.786
30147.m014242 Ricinus communis 30147.m014242 I 0.781
Bo7g098740 Brassica oleracea Bo7g098740 N 0.780
Bra012953 Brassica rapa Bra012953 N 0.780
Lus10038929.g Linum usitatissimum Lus10038929.g N 0.776
Ciclev10007101m.g Citrus clementina Ciclev10007101m.g I 0.772
Cla001400 Citrullus lanatus Cla001400 I 0.769
Eucgr.K00165 Eucalyptus grandis Eucgr.K00165 I 0.768
evm.TU.supercontig_111.55 Carica papaya evm.TU.supercontig_111.55 N 0.767
Bo4g104940 Brassica oleracea Bo4g104940 I 0.766
Bo6g077190 Brassica oleracea Bo6g077190 I 0.766
Bo8g095300 Brassica oleracea Bo8g095300 I 0.766
Bra003422 Brassica rapa Bra003422 I 0.766
Bra007545 Brassica rapa Bra007545 I 0.766
Bra014483 Brassica rapa Bra014483 I 0.766
Thhalv10006508m.g Eutrema salsugineum Thhalv10006508m.g I 0.766
Thhalv10005323m.g Eutrema salsugineum Thhalv10005323m.g N 0.762