CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Bostr.13158s0196 *(Boechera stricta)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02365 (NAM)	IPR003441	Bostr.13158s0196	T297251_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NAC066 M00978_2.00	Arabidopsis thaliana	NBNNHNBNNN	NNNVNDNNVN	PBM Lindemose et al.(2014) NST2	0.959	0.956
NAC043 M02370_2.00	Arabidopsis thaliana	NTTACGYWAN	NTWRCGTAAN	PBM Weirauch et al.(2014) pTH8161	0.958	0.939
NAC043 M07192_2.00	Arabidopsis thaliana	TRCKTVHDNHNYAMG	CKTRNDNHDBAMGYA	Dap-seq OMalley et al.(2016) NST1_colamp_a	0.958	0.939
NAC043 M07193_2.00	Arabidopsis thaliana	RCKTVHDNHNYAMGYWA	TWRCKTRNDNHDBAMGY	Dap-seq OMalley et al.(2016) NST1_col_v31	0.958	0.939
OS06G0131700 M02378_2.00	Oryza sativa	NNNNHMDNND	HNNHKDNNNN	PBM Weirauch et al.(2014) pTH8356	0.923	0.860
MDP0000762302 M02383_2.00	Malus domestica	NNNAMKHNWN	NWNDMKTNNN	PBM Weirauch et al.(2014) pTH9205	0.908	0.886
NAC012 M00971_2.00	Arabidopsis thaliana	NYAMGYHANN	NNTDRCKTRN	PBM Lindemose et al.(2014) SND1	0.902	0.877
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Bostr.13158s0196.1.p	NAC/NAM	12	139	PPGFRFHPTEEELLQYYLRKKISNIKIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATTVGFWKATGRDKIIYTNGDRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL

Links
Other NAC/NAM family TFs
Other *Boechera stricta* TFs