CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Lus10038937.g *(Linum usitatissimum)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02365 (NAM)	IPR003441	Lus10038937.g	T298363_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
anac058 M00886_2.00	Arabidopsis thaliana	CGTTGTCT	AGACAACG	PBM Franco-Zorrilla et al.(2014) ANAC58	0.926	0.789
anac058 M07210_2.00	Arabidopsis thaliana	CKTGHNNNRCAMGYWA	TWRCKTGYNNNDCAMG	Dap-seq OMalley et al.(2016) ANAC058_col_a	0.926	0.789
anac058 M07211_2.00	Arabidopsis thaliana	TDCKTGHNNNDCAMGHHA	TDDCKTGHNNNDCAMGHA	Dap-seq OMalley et al.(2016) ANAC058_colamp_a	0.926	0.789
ANAC038 M07188_2.00	Arabidopsis thaliana	DNCKTRHNNHDCAMGYWA	TWRCKTGHDNNDYAMGNH	Dap-seq OMalley et al.(2016) ANAC038_col_a	0.879	0.711
ANAC038 M07189_2.00	Arabidopsis thaliana	TTDCTTGWNNHDYAMGHHAHH	DDTDDCKTRHDNNWCAAGHAA	Dap-seq OMalley et al.(2016) ANAC038_colamp_a	0.879	0.711
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Lus10038937	NAC/NAM	7	133	PPGFRFHPTDEELVSFYLTHRISDKSFTCRAIVDVDLNKNEPWDLPGKASMGEKEWYFFNVRDRKYPTGLRTNRATEAGYWKTTGRDKEIFCTTTGVLIGMKKTLVFYQGRAPKGQKSNWVIHEFRL

Links
Other NAC/NAM family TFs
Other *Linum usitatissimum* TFs