CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ANAC038
(
Arabidopsis thaliana
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AT2G24430
T292051_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Identified in an enhancer trap line; member of the NAC family of proteins. Expressed at the boundary between the shoot meristem and lateral organs and the polar nuclei in the embryo sac.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC038
M07188_2.00
Arabidopsis thaliana
DNCKTRHNNHDCAMGYWA
TWRCKTGHDNNDYAMGNH
Dap-seq
OMalley et al.(2016)
ANAC038_col_a
(Direct)
(Direct)
ANAC038
M07189_2.00
Arabidopsis thaliana
TTDCTTGWNNHDYAMGHHAHH
DDTDDCKTRHDNNWCAAGHAA
Dap-seq
OMalley et al.(2016)
ANAC038_colamp_a
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
anac058
M00886_2.00
Arabidopsis thaliana
CGTTGTCT
AGACAACG
PBM
Franco-Zorrilla et al.(2014)
ANAC58
0.900
0.781
anac058
M07210_2.00
Arabidopsis thaliana
CKTGHNNNRCAMGYWA
TWRCKTGYNNNDCAMG
Dap-seq
OMalley et al.(2016)
ANAC058_col_a
0.900
0.781
anac058
M07211_2.00
Arabidopsis thaliana
TDCKTGHNNNDCAMGHHA
TDDCKTGHNNNDCAMGHA
Dap-seq
OMalley et al.(2016)
ANAC058_colamp_a
0.900
0.781
NAC079
M02373_2.00
Arabidopsis thaliana
TTGCGTRY
RYACGCAA
PBM
Weirauch et al.(2014)
pTH7399
0.879
0.754
NAC079
M07228_2.00
Arabidopsis thaliana
CBWNHNNHACACGYWA
TWRCGTGTDNNDNWVG
Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a
0.879
0.754
NAC079
M07229_2.00
Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH
DTWRCKTGWDNNDBAMGNWAN
Dap-seq
OMalley et al.(2016)
ANAC079_col
0.879
0.754
ANAC080
M02376_2.00
Arabidopsis lyrata
NBAMKNHWNN
NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH9230
0.876
0.763
NAC100
M02375_2.00
Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH7239
0.873
0.763
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G24430.1
NAC/NAM
17
143
PPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDLNKSEPWELPEKAKMGGKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAPRGEKTCWVMHEYRL
AT2G24430.2
NAC/NAM
17
143
PPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDLNKSEPWELPEKAKMGGKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAPRGEKTCWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Arabidopsis thaliana
TFs
241 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.27895s0039
Boechera stricta
Bostr.27895s0039
I
0.974
Bra032095
Brassica rapa
Bra032095
I
0.974
ANAC039
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_4000352
I
0.974
Cagra.4091s0015
Capsella grandiflora
Cagra.4091s0015
I
0.974
Carubv10025508m.g
Capsella rubella
Carubv10025508m.g
I
0.974
Bo8g099810
Brassica oleracea
Bo8g099810
I
0.974
Bra007855
Brassica rapa
Bra007855
I
0.974
Thhalv10000520m.g
Eutrema salsugineum
Thhalv10000520m.g
I
0.973
Bo4g154590
Brassica oleracea
Bo4g154590
I
0.969
GLYMA14G20276
Glycine max
GLYMA14G20276
I
0.953
Solyc08g006020.2
Solanum lycopersicum
Solyc08g006020.2
I
0.953
PGSC0003DMG400014845
Solanum tuberosum
PGSC0003DMG400014845
I
0.950
28226.m000851
Ricinus communis
28226.m000851
I
0.949
evm.TU.supercontig_244.7
Carica papaya
evm.TU.supercontig_244.7
I
0.949
PRUPE_ppa025916mg
Prunus persica
PRUPE_ppa025916mg
I
0.947
MTR_3g109340
Medicago truncatula
MTR_3g109340
I
0.947
gene08765-v1.0-hybrid
Fragaria vesca
gene08765-v1.0-hybrid
I
0.947
Pm005091
Prunus mume
Pm005091
I
0.947
MDP0000232008
Malus domestica
MDP0000232008
I
0.946
Gorai.010G124100
Gossypium raimondii
Gorai.010G124100
I
0.946
TCM_036791
Theobroma cacao
TCM_036791
I
0.946
cassava18338.valid.m1
Manihot esculenta
cassava18338.valid.m1
I
0.946
Ciclev10008885m.g
Citrus clementina
Ciclev10008885m.g
I
0.946
Eucgr.C02105
Eucalyptus grandis
Eucgr.C02105
I
0.946
ANAC039
Vitis vinifera
VIT_04s0008g02710
I
0.946
orange1.1g037591m.g
Citrus sinensis
orange1.1g037591m.g
I
0.946
chr1.LjT35C22.60.nc
Lotus japonicus
chr1.LjT35C22.60.nc
I
0.945
MDP0000690168
Malus domestica
MDP0000690168
I
0.945
PK02366.1
Cannabis sativa
PK02366.1
I
0.943
GLYMA04G08320
Glycine max
GLYMA04G08320
I
0.937
GLYMA06G08440
Glycine max
GLYMA06G08440
I
0.936
Cla022572
Citrullus lanatus
Cla022572
I
0.935
Cucsa.161510
Cucumis sativus
Cucsa.161510
I
0.935
SapurV1A.1285s0100
Salix purpurea
SapurV1A.1285s0100
I
0.933
SapurV1A.1363s0020
Salix purpurea
SapurV1A.1363s0020
I
0.933
POPTR_0018s03910
Populus trichocarpa
POPTR_0018s03910
I
0.933
Aquca_018_00116
Aquilegia coerulea
Aquca_018_00116
I
0.933
Lus10026966.g
Linum usitatissimum
Lus10026966.g
I
0.931
SapurV1A.0263s0310
Salix purpurea
SapurV1A.0263s0310
I
0.931
POPTR_0006s29180
Populus trichocarpa
POPTR_0006s29180
I
0.928
Lus10020165.g
Linum usitatissimum
Lus10020165.g
I
0.928
mgf025158m
Mimulus guttatus
mgf025158m
I
0.927
GSMUA_Achr7G19680_001
Musa acuminata
GSMUA_Achr7G19680_001
I
0.926
gene26043-v1.0-hybrid
Fragaria vesca
gene26043-v1.0-hybrid
I
0.917
Lus10001648.g
Linum usitatissimum
Lus10001648.g
I
0.915
Lus10021659.g
Linum usitatissimum
Lus10021659.g
I
0.915
MTR_4g108760
Medicago truncatula
MTR_4g108760
I
0.914
MTR_1g008740
Medicago truncatula
MTR_1g008740
I
0.912
GLYMA13G34950
Glycine max
GLYMA13G34950
I
0.912
AMTR_s00025p00174590
Amborella trichopoda
AMTR_s00025p00174590
I
0.912
GLYMA12G35530
Glycine max
GLYMA12G35530
I
0.912
GSMUA_Achr10G22350_001
Musa acuminata
GSMUA_Achr10G22350_001
I
0.911
Bra003023
Brassica rapa
Bra003023
I
0.911
Ca_11021
Cicer arietinum
Ca_11021
I
0.910
30138.m004055
Ricinus communis
30138.m004055
I
0.910
GRMZM2G386163
Zea mays
GRMZM2G386163
I
0.910
SapurV1A.0377s0130
Salix purpurea
SapurV1A.0377s0130
I
0.910
POPTR_0012s01610
Populus trichocarpa
POPTR_0012s01610
I
0.910
cassava17517.valid.m1
Manihot esculenta
cassava17517.valid.m1
I
0.910
ONIVA09G15800
Oryza nivara
ONIVA09G15800
I
0.909
Bra001705
Brassica rapa
Bra001705
I
0.909
Bo3g071500
Brassica oleracea
Bo3g071500
I
0.909
ORUFI09G16430
Oryza rufipogon
ORUFI09G16430
I
0.909
OS09G0497900
Oryza sativa
OS09G0497900
I
0.909
BGIOSGA029508
Oryza indica
BGIOSGA029508
I
0.909
Bo01320s020
Brassica oleracea
Bo01320s020
I
0.909
ORGLA09G0117400
Oryza glaberrima
ORGLA09G0117400
I
0.909
OPUNC09G13640
Oryza punctata
OPUNC09G13640
I
0.909
OMERI07G04410
Oryza meridionalis
OMERI07G04410
I
0.909
LPERR09G11330
Leersia perrieri
LPERR09G11330
I
0.909
Bra022319
Brassica rapa
Bra022319
I
0.909
OBART09G15220
Oryza barthii
OBART09G15220
I
0.909
OLONG_009674
Oryza longistaminata
OLONG_009674
I
0.909
OGLUM09G15820
Oryza glumaepatula
OGLUM09G15820
I
0.909
cassava46147.m1
Manihot esculenta
cassava46147.m1
I
0.909
Ciclev10020480m.g
Citrus clementina
Ciclev10020480m.g
I
0.908
orange1.1g017827m.g
Citrus sinensis
orange1.1g017827m.g
I
0.908
Pavir.J02772
Panicum virgatum
Pavir.J02772
I
0.908
Si030187m.g
Setaria italica
Si030187m.g
I
0.908
Sb02g028870
Sorghum bicolor
Sb02g028870
I
0.908
Solyc03g115850.2
Solanum lycopersicum
Solyc03g115850.2
I
0.907
VIT_19s0014g02200
Vitis vinifera
VIT_19s0014g02200
I
0.907
Solyc06g069710.2
Solanum lycopersicum
Solyc06g069710.2
I
0.906
POPTR_0015s02170
Populus trichocarpa
POPTR_0015s02170
I
0.905
MDP0000246482
Malus domestica
MDP0000246482
I
0.905
Thhalv10021200m.g
Eutrema salsugineum
Thhalv10021200m.g
I
0.905
MDP0000153949
Malus domestica
MDP0000153949
I
0.905
PGSC0003DMG400033047
Solanum tuberosum
PGSC0003DMG400033047
I
0.905
LjSGA_071377.1
Lotus japonicus
LjSGA_071377.1
I
0.904
POPTR_0012s05280
Populus trichocarpa
POPTR_0012s05280
I
0.904
Cagra.1681s0009
Capsella grandiflora
Cagra.1681s0009
I
0.904
PGSC0003DMG400019523
Solanum tuberosum
PGSC0003DMG400019523
I
0.904
Cucsa.122890
Cucumis sativus
Cucsa.122890
I
0.904
27950.m000105
Ricinus communis
27950.m000105
I
0.903
Cla023717
Citrullus lanatus
Cla023717
I
0.903
evm.TU.supercontig_131.88
Carica papaya
evm.TU.supercontig_131.88
I
0.903
Gorai.002G067300
Gossypium raimondii
Gorai.002G067300
I
0.903
TCM_031619
Theobroma cacao
TCM_031619
I
0.903
GLYMA12G26190
Glycine max
GLYMA12G26190
I
0.903
AMTR_s00079p00099620
Amborella trichopoda
AMTR_s00079p00099620
I
0.903
GLYMA06G35660
Glycine max
GLYMA06G35660
I
0.903
GRMZM2G008374
Zea mays
GRMZM2G008374
I
0.902
PDK_20s1323531g003
Phoenix dactylifera
PDK_20s1323531g003
I
0.902
PGSC0003DMG400029593
Solanum tuberosum
PGSC0003DMG400029593
I
0.901
Carubv10015990m.g
Capsella rubella
Carubv10015990m.g
I
0.901
SapurV1A.1146s0010
Salix purpurea
SapurV1A.1146s0010
I
0.901
evm.TU.supercontig_3.509
Carica papaya
evm.TU.supercontig_3.509
I
0.901
SapurV1A.1381s0060
Salix purpurea
SapurV1A.1381s0060
I
0.901
SapurV1A.1381s0050
Salix purpurea
SapurV1A.1381s0050
I
0.901
anac058
Arabidopsis thaliana
AT3G18400
D
0.900
anac058
Arabidopsis lyrata
Al_scaffold_0003_1942
I
0.900
Lus10005537.g
Linum usitatissimum
Lus10005537.g
I
0.900
Solyc08g074300.2
Solanum lycopersicum
Solyc08g074300.2
I
0.900
Lus10041924.g
Linum usitatissimum
Lus10041924.g
I
0.900
PRUPE_ppa026810mg
Prunus persica
PRUPE_ppa026810mg
I
0.899
Ca_22532
Cicer arietinum
Ca_22532
I
0.899
cassava44869.m1
Manihot esculenta
cassava44869.m1
I
0.899
cassava9086.m1
Manihot esculenta
cassava9086.m1
I
0.899
Cla019391
Citrullus lanatus
Cla019391
I
0.899
Pm011397
Prunus mume
Pm011397
I
0.899
mgf021065m
Mimulus guttatus
mgf021065m
I
0.899
MDP0000310981
Malus domestica
MDP0000310981
I
0.899
Cucsa.197830
Cucumis sativus
Cucsa.197830
I
0.898
Bostr.19424s0822
Boechera stricta
Bostr.19424s0822
I
0.898
GSMUA_Achr6G01770_001
Musa acuminata
GSMUA_Achr6G01770_001
I
0.898
POPTR_0001s40680
Populus trichocarpa
POPTR_0001s40680
I
0.898
Gorai.006G060900
Gossypium raimondii
Gorai.006G060900
I
0.898
SapurV1A.0207s0120
Salix purpurea
SapurV1A.0207s0120
I
0.898
Gorai.007G323900
Gossypium raimondii
Gorai.007G323900
I
0.897
OGLUM06G14810
Oryza glumaepatula
OGLUM06G14810
I
0.897
OBART06G13940
Oryza barthii
OBART06G13940
I
0.897
F775_52293
Aegilops tauschii
F775_52293
I
0.897
BGIOSGA022861
Oryza indica
BGIOSGA022861
I
0.897
OLONG_019251
Oryza longistaminata
OLONG_019251
I
0.897
MTR_2g078700
Medicago truncatula
MTR_2g078700
I
0.897
POPTR_0015s03700
Populus trichocarpa
POPTR_0015s03700
I
0.897
Bostr.26675s0262
Boechera stricta
Bostr.26675s0262
I
0.897
chr3.CM0282.730.nc
Lotus japonicus
chr3.CM0282.730.nc
I
0.897
OB06G22100
Oryza brachyantha
OB06G22100
I
0.897
Ciclev10023578m.g
Citrus clementina
Ciclev10023578m.g
I
0.897
MLOC_68185
Hordeum vulgare
MLOC_68185
I
0.897
OPUNC06G13130
Oryza punctata
OPUNC06G13130
I
0.897
ONIVA03G33370
Oryza nivara
ONIVA03G33370
I
0.897
ORGLA06G0124600
Oryza glaberrima
ORGLA06G0124600
I
0.897
OS06G0344900
Oryza sativa
OS06G0344900
I
0.897
ORUFI06G14810
Oryza rufipogon
ORUFI06G14810
I
0.897
TRIUR3_20591
Triticum urartu
TRIUR3_20591
I
0.897
29974.m000235
Ricinus communis
29974.m000235
I
0.897
LPERR06G12840
Leersia perrieri
LPERR06G12840
I
0.896
Eucgr.K02225
Eucalyptus grandis
Eucgr.K02225
I
0.896
Thhalv10011708m.g
Eutrema salsugineum
Thhalv10011708m.g
I
0.896
Solyc12g036480.1
Solanum lycopersicum
Solyc12g036480.1
I
0.896
TCM_012350
Theobroma cacao
TCM_012350
I
0.896
Gorai.013G171300
Gossypium raimondii
Gorai.013G171300
I
0.896
Eucgr.B00724
Eucalyptus grandis
Eucgr.B00724
I
0.895
cassava2919.m1
Manihot esculenta
cassava2919.m1
I
0.895
Aquca_033_00035
Aquilegia coerulea
Aquca_033_00035
I
0.894
SapurV1A.1325s0010
Salix purpurea
SapurV1A.1325s0010
I
0.893
gene00971-v1.0-hybrid
Fragaria vesca
gene00971-v1.0-hybrid
I
0.893
POPTR_0011s11600
Populus trichocarpa
POPTR_0011s11600
I
0.893
SapurV1A.2059s0010
Salix purpurea
SapurV1A.2059s0010
I
0.893
Si036535m.g
Setaria italica
Si036535m.g
I
0.893
Aquca_026_00305
Aquilegia coerulea
Aquca_026_00305
I
0.893
mgf021404m
Mimulus guttatus
mgf021404m
I
0.892
SELMODRAFT_67245
Selaginella moellendorffii
SELMODRAFT_67245
I
0.891
TRIUR3_00446
Triticum urartu
TRIUR3_00446
I
0.891
SELMODRAFT_71303
Selaginella moellendorffii
SELMODRAFT_71303
I
0.891
SapurV1A.0719s0060
Salix purpurea
SapurV1A.0719s0060
I
0.891
OMERI03G23890
Oryza meridionalis
OMERI03G23890
I
0.890
AMTR_s00058p00136280
Amborella trichopoda
AMTR_s00058p00136280
I
0.890
ORGLA03G0246300
Oryza glaberrima
ORGLA03G0246300
I
0.890
ONIVA03G27500
Oryza nivara
ONIVA03G27500
I
0.890
OGLUM03G27330
Oryza glumaepatula
OGLUM03G27330
I
0.890
OPUNC03G24220
Oryza punctata
OPUNC03G24220
I
0.890
ORUFI03G27440
Oryza rufipogon
ORUFI03G27440
I
0.890
OBART03G26480
Oryza barthii
OBART03G26480
I
0.890
BGIOSGA013151
Oryza indica
BGIOSGA013151
I
0.890
OS03G0624600
Oryza sativa
OS03G0624600
I
0.890
Lus10009669.g
Linum usitatissimum
Lus10009669.g
I
0.889
PGSC0003DMG400005384
Solanum tuberosum
PGSC0003DMG400005384
I
0.889
MDP0000135860
Malus domestica
MDP0000135860
I
0.889
anac058
Vitis vinifera
VIT_17s0000g03660
I
0.889
LPERR03G21900
Leersia perrieri
LPERR03G21900
I
0.889
Ciclev10008619m.g
Citrus clementina
Ciclev10008619m.g
I
0.889
orange1.1g047710m.g
Citrus sinensis
orange1.1g047710m.g
I
0.889
BRADI4G34157
Brachypodium distachyon
BRADI4G34157
I
0.888
Sb01g014310
Sorghum bicolor
Sb01g014310
I
0.886
Eucgr.B00529
Eucalyptus grandis
Eucgr.B00529
I
0.886
Bra037585
Brassica rapa
Bra037585
I
0.885
Lus10009029.g
Linum usitatissimum
Lus10009029.g
I
0.885
Bo1g117610
Brassica oleracea
Bo1g117610
I
0.885
PK23488.1
Cannabis sativa
PK23488.1
I
0.884
Pavir.Ib03976
Panicum virgatum
Pavir.Ib03976
I
0.883
Lus10027227.g
Linum usitatissimum
Lus10027227.g
I
0.882
GSMUA_Achr8G24680_001
Musa acuminata
GSMUA_Achr8G24680_001
I
0.882
Aquca_002_00662
Aquilegia coerulea
Aquca_002_00662
I
0.882
MLOC_68284
Hordeum vulgare
MLOC_68284
I
0.881
Pavir.Ia01262
Panicum virgatum
Pavir.Ia01262
I
0.881
BRADI1G14467
Brachypodium distachyon
BRADI1G14467
I
0.881
SapurV1A.0346s0160
Salix purpurea
SapurV1A.0346s0160
I
0.881
Bra028685
Brassica rapa
Bra028685
I
0.881
Traes_4AL_B44DF4ACC
Triticum aestivum
Traes_4AL_B44DF4ACC
I
0.881
Traes_4BS_373BDBA94
Triticum aestivum
Traes_4BS_373BDBA94
I
0.881
TRIUR3_27612
Triticum urartu
TRIUR3_27612
I
0.881
F775_05949
Aegilops tauschii
F775_05949
I
0.881
cassava361.valid.m1
Manihot esculenta
cassava361.valid.m1
I
0.880
Lus10038937.g
Linum usitatissimum
Lus10038937.g
I
0.879
NAC079
Arabidopsis thaliana
AT5G07680
D
0.879
mgf003818m
Mimulus guttatus
mgf003818m
I
0.879
Gorai.008G194400
Gossypium raimondii
Gorai.008G194400
I
0.878
Traes_5BL_657BF1497
Triticum aestivum
Traes_5BL_657BF1497
I
0.878
28649.m000212
Ricinus communis
28649.m000212
I
0.878
Thhalv10014081m.g
Eutrema salsugineum
Thhalv10014081m.g
I
0.877
cassava1758.valid.m1
Manihot esculenta
cassava1758.valid.m1
I
0.877
Bostr.13129s0198
Boechera stricta
Bostr.13129s0198
I
0.877
PGSC0003DMG400028779
Solanum tuberosum
PGSC0003DMG400028779
I
0.877
Cagra.2925s0018
Capsella grandiflora
Cagra.2925s0018
I
0.877
Carubv10001372m.g
Capsella rubella
Carubv10001372m.g
I
0.877
Solyc07g062840.2
Solanum lycopersicum
Solyc07g062840.2
I
0.877
GLYMA17G10970
Glycine max
GLYMA17G10970
I
0.876
ANAC080
Arabidopsis lyrata
fgenesh2_kg.6__736__AT5G07680.1
D
0.876
GLYMA05G00930
Glycine max
GLYMA05G00930
I
0.876
OB03G34470
Oryza brachyantha
OB03G34470
I
0.875
AMTR_s00010p00266320
Amborella trichopoda
AMTR_s00010p00266320
I
0.875
cassava1757.valid.m1
Manihot esculenta
cassava1757.valid.m1
I
0.874
Bra022685
Brassica rapa
Bra022685
I
0.874
PRUPE_ppa007653mg
Prunus persica
PRUPE_ppa007653mg
I
0.874
Bo2g043280
Brassica oleracea
Bo2g043280
I
0.874
Thhalv10004550m.g
Eutrema salsugineum
Thhalv10004550m.g
I
0.874
NAC100
Arabidopsis thaliana
AT5G61430
D
0.873
GLYMA06G21020
Glycine max
GLYMA06G21020
I
0.873
Sb08g006330
Sorghum bicolor
Sb08g006330
I
0.872
Pavir.J00978
Panicum virgatum
Pavir.J00978
I
0.871
Solyc06g069100.1
Solanum lycopersicum
Solyc06g069100.1
I
0.871
TCM_014073
Theobroma cacao
TCM_014073
I
0.871
GRMZM2G393433
Zea mays
GRMZM2G393433
I
0.871
Thhalv10013863m.g
Eutrema salsugineum
Thhalv10013863m.g
I
0.871
Bo9g113820
Brassica oleracea
Bo9g113820
I
0.871
evm.TU.supercontig_111.22
Carica papaya
evm.TU.supercontig_111.22
I
0.871
Si007886m.g
Setaria italica
Si007886m.g
I
0.871