CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00025p00174590
(
Amborella trichopoda
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AMTR_s00025p00174590
T291980_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC038
M07188_2.00
Arabidopsis thaliana
DNCKTRHNNHDCAMGYWA
TWRCKTGHDNNDYAMGNH
Dap-seq
OMalley et al.(2016)
ANAC038_col_a
0.912
0.789
ANAC038
M07189_2.00
Arabidopsis thaliana
TTDCTTGWNNHDYAMGHHAHH
DDTDDCKTRHDNNWCAAGHAA
Dap-seq
OMalley et al.(2016)
ANAC038_colamp_a
0.912
0.789
NAC098
M07239_2.00
Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG
Dap-seq
OMalley et al.(2016)
CUC2_colamp_a
0.905
0.763
NAC098
M07240_2.00
Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN
Dap-seq
OMalley et al.(2016)
CUC2_col
0.905
0.763
anac058
M00886_2.00
Arabidopsis thaliana
CGTTGTCT
AGACAACG
PBM
Franco-Zorrilla et al.(2014)
ANAC58
0.904
0.763
anac058
M07210_2.00
Arabidopsis thaliana
CKTGHNNNRCAMGYWA
TWRCKTGYNNNDCAMG
Dap-seq
OMalley et al.(2016)
ANAC058_col_a
0.904
0.763
anac058
M07211_2.00
Arabidopsis thaliana
TDCKTGHNNNDCAMGHHA
TDDCKTGHNNNDCAMGHA
Dap-seq
OMalley et al.(2016)
ANAC058_colamp_a
0.904
0.763
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN12495
NAC/NAM
10
136
PPGFRFHPTDDELLSYYLTQKISDSSYVGRAIADVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGLRTNRATDSGYWKTTGKDKEVFRATTSELAGTKKTLVFYKGRAPKGEKTSWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Amborella trichopoda
TFs
243 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene08765-v1.0-hybrid
Fragaria vesca
gene08765-v1.0-hybrid
I
0.946
Ciclev10008885m.g
Citrus clementina
Ciclev10008885m.g
I
0.945
cassava18338.valid.m1
Manihot esculenta
cassava18338.valid.m1
I
0.945
TCM_036791
Theobroma cacao
TCM_036791
I
0.945
Gorai.010G124100
Gossypium raimondii
Gorai.010G124100
I
0.945
orange1.1g037591m.g
Citrus sinensis
orange1.1g037591m.g
I
0.945
chr1.LjT35C22.60.nc
Lotus japonicus
chr1.LjT35C22.60.nc
I
0.944
ANAC039
Vitis vinifera
VIT_04s0008g02710
I
0.944
GLYMA14G20276
Glycine max
GLYMA14G20276
I
0.943
GLYMA06G08440
Glycine max
GLYMA06G08440
I
0.941
GLYMA04G08320
Glycine max
GLYMA04G08320
I
0.941
Aquca_018_00116
Aquilegia coerulea
Aquca_018_00116
I
0.940
Pm005091
Prunus mume
Pm005091
I
0.939
PRUPE_ppa025916mg
Prunus persica
PRUPE_ppa025916mg
I
0.939
28226.m000851
Ricinus communis
28226.m000851
I
0.938
Bra003023
Brassica rapa
Bra003023
I
0.938
evm.TU.supercontig_244.7
Carica papaya
evm.TU.supercontig_244.7
I
0.938
MDP0000232008
Malus domestica
MDP0000232008
I
0.938
MDP0000690168
Malus domestica
MDP0000690168
I
0.938
MTR_3g109340
Medicago truncatula
MTR_3g109340
I
0.936
GSMUA_Achr7G19680_001
Musa acuminata
GSMUA_Achr7G19680_001
I
0.934
Eucgr.C02105
Eucalyptus grandis
Eucgr.C02105
I
0.934
mgf025158m
Mimulus guttatus
mgf025158m
I
0.934
Lus10009029.g
Linum usitatissimum
Lus10009029.g
I
0.932
POPTR_0006s29180
Populus trichocarpa
POPTR_0006s29180
I
0.932
POPTR_0018s03910
Populus trichocarpa
POPTR_0018s03910
I
0.932
SapurV1A.1363s0020
Salix purpurea
SapurV1A.1363s0020
I
0.932
SapurV1A.1285s0100
Salix purpurea
SapurV1A.1285s0100
I
0.932
Cucsa.161510
Cucumis sativus
Cucsa.161510
I
0.930
Cla022572
Citrullus lanatus
Cla022572
I
0.930
SapurV1A.0263s0310
Salix purpurea
SapurV1A.0263s0310
I
0.929
Lus10009669.g
Linum usitatissimum
Lus10009669.g
I
0.928
Lus10026966.g
Linum usitatissimum
Lus10026966.g
I
0.925
Lus10020165.g
Linum usitatissimum
Lus10020165.g
I
0.922
POPTR_0011s11600
Populus trichocarpa
POPTR_0011s11600
I
0.921
SapurV1A.2059s0010
Salix purpurea
SapurV1A.2059s0010
I
0.921
Solyc08g006020.2
Solanum lycopersicum
Solyc08g006020.2
I
0.921
SapurV1A.1325s0010
Salix purpurea
SapurV1A.1325s0010
I
0.921
GRMZM2G386163
Zea mays
GRMZM2G386163
I
0.921
OMERI07G04410
Oryza meridionalis
OMERI07G04410
I
0.920
OLONG_009674
Oryza longistaminata
OLONG_009674
I
0.920
OBART09G15220
Oryza barthii
OBART09G15220
I
0.920
ONIVA09G15800
Oryza nivara
ONIVA09G15800
I
0.920
OGLUM09G15820
Oryza glumaepatula
OGLUM09G15820
I
0.920
Sb02g028870
Sorghum bicolor
Sb02g028870
I
0.920
LPERR09G11330
Leersia perrieri
LPERR09G11330
I
0.920
Pavir.J02772
Panicum virgatum
Pavir.J02772
I
0.920
OS09G0497900
Oryza sativa
OS09G0497900
I
0.920
ORUFI09G16430
Oryza rufipogon
ORUFI09G16430
I
0.920
ORGLA09G0117400
Oryza glaberrima
ORGLA09G0117400
I
0.920
OPUNC09G13640
Oryza punctata
OPUNC09G13640
I
0.920
Si030187m.g
Setaria italica
Si030187m.g
I
0.920
BGIOSGA029508
Oryza indica
BGIOSGA029508
I
0.920
PGSC0003DMG400014845
Solanum tuberosum
PGSC0003DMG400014845
I
0.918
PK02366.1
Cannabis sativa
PK02366.1
I
0.918
MTR_4g108760
Medicago truncatula
MTR_4g108760
I
0.915
Bo01320s020
Brassica oleracea
Bo01320s020
I
0.915
Bra022319
Brassica rapa
Bra022319
I
0.915
Bra001705
Brassica rapa
Bra001705
I
0.915
Bo3g071500
Brassica oleracea
Bo3g071500
I
0.915
cassava44869.m1
Manihot esculenta
cassava44869.m1
I
0.913
MDP0000310981
Malus domestica
MDP0000310981
I
0.913
PRUPE_ppa026810mg
Prunus persica
PRUPE_ppa026810mg
I
0.913
Pm011397
Prunus mume
Pm011397
I
0.913
SapurV1A.1381s0060
Salix purpurea
SapurV1A.1381s0060
I
0.913
Thhalv10000520m.g
Eutrema salsugineum
Thhalv10000520m.g
I
0.913
SapurV1A.1381s0050
Salix purpurea
SapurV1A.1381s0050
I
0.913
Gorai.007G323900
Gossypium raimondii
Gorai.007G323900
I
0.912
ANAC038
Arabidopsis thaliana
AT2G24430
D
0.912
Bostr.27895s0039
Boechera stricta
Bostr.27895s0039
I
0.912
Bo8g099810
Brassica oleracea
Bo8g099810
I
0.912
ANAC039
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_4000352
I
0.912
evm.TU.supercontig_3.509
Carica papaya
evm.TU.supercontig_3.509
I
0.912
27950.m000105
Ricinus communis
27950.m000105
I
0.912
Carubv10025508m.g
Capsella rubella
Carubv10025508m.g
I
0.912
Bra007855
Brassica rapa
Bra007855
I
0.912
Bra032095
Brassica rapa
Bra032095
I
0.912
evm.TU.supercontig_131.88
Carica papaya
evm.TU.supercontig_131.88
I
0.912
Gorai.002G067300
Gossypium raimondii
Gorai.002G067300
I
0.912
cassava2919.m1
Manihot esculenta
cassava2919.m1
I
0.912
TCM_031619
Theobroma cacao
TCM_031619
I
0.912
Cagra.4091s0015
Capsella grandiflora
Cagra.4091s0015
I
0.912
Aquca_026_00305
Aquilegia coerulea
Aquca_026_00305
I
0.912
OGLUM03G27330
Oryza glumaepatula
OGLUM03G27330
I
0.911
MDP0000153949
Malus domestica
MDP0000153949
I
0.911
ORUFI03G27440
Oryza rufipogon
ORUFI03G27440
I
0.911
OMERI03G23890
Oryza meridionalis
OMERI03G23890
I
0.911
ONIVA03G27500
Oryza nivara
ONIVA03G27500
I
0.911
OBART03G26480
Oryza barthii
OBART03G26480
I
0.911
BGIOSGA013151
Oryza indica
BGIOSGA013151
I
0.911
OS03G0624600
Oryza sativa
OS03G0624600
I
0.911
ORGLA03G0246300
Oryza glaberrima
ORGLA03G0246300
I
0.911
MDP0000246482
Malus domestica
MDP0000246482
I
0.911
Lus10041924.g
Linum usitatissimum
Lus10041924.g
I
0.910
POPTR_0012s05280
Populus trichocarpa
POPTR_0012s05280
I
0.910
Ciclev10023578m.g
Citrus clementina
Ciclev10023578m.g
I
0.910
Lus10005537.g
Linum usitatissimum
Lus10005537.g
I
0.910
Thhalv10021200m.g
Eutrema salsugineum
Thhalv10021200m.g
I
0.910
Cagra.1681s0009
Capsella grandiflora
Cagra.1681s0009
I
0.910
LPERR03G21900
Leersia perrieri
LPERR03G21900
I
0.909
Bo9g113820
Brassica oleracea
Bo9g113820
I
0.909
Thhalv10013863m.g
Eutrema salsugineum
Thhalv10013863m.g
I
0.909
GSMUA_Achr10G22350_001
Musa acuminata
GSMUA_Achr10G22350_001
I
0.908
cassava9086.m1
Manihot esculenta
cassava9086.m1
I
0.908
POPTR_0015s03700
Populus trichocarpa
POPTR_0015s03700
I
0.908
Carubv10015990m.g
Capsella rubella
Carubv10015990m.g
I
0.907
AMTR_s00079p00099620
Amborella trichopoda
AMTR_s00079p00099620
I
0.906
chr3.CM0282.730.nc
Lotus japonicus
chr3.CM0282.730.nc
I
0.906
Ciclev10008619m.g
Citrus clementina
Ciclev10008619m.g
I
0.906
orange1.1g047710m.g
Citrus sinensis
orange1.1g047710m.g
I
0.906
Solyc07g062840.2
Solanum lycopersicum
Solyc07g062840.2
I
0.906
anac058
Vitis vinifera
VIT_17s0000g03660
I
0.906
Cagra.4622s0005
Capsella grandiflora
Cagra.4622s0005
I
0.905
POPTR_0012s01610
Populus trichocarpa
POPTR_0012s01610
I
0.905
30138.m004055
Ricinus communis
30138.m004055
I
0.905
CUC2
Arabidopsis lyrata
Al_scaffold_0008_1815
I
0.905
Eucgr.B00724
Eucalyptus grandis
Eucgr.B00724
I
0.905
Bostr.26833s0880
Boechera stricta
Bostr.26833s0880
I
0.905
Carubv10028330m.g
Capsella rubella
Carubv10028330m.g
I
0.905
MTR_1g008740
Medicago truncatula
MTR_1g008740
I
0.905
SapurV1A.0377s0130
Salix purpurea
SapurV1A.0377s0130
I
0.905
NAC098
Arabidopsis thaliana
AT5G53950
D
0.905
cassava17517.valid.m1
Manihot esculenta
cassava17517.valid.m1
I
0.905
MDP0000135860
Malus domestica
MDP0000135860
I
0.905
Pavir.Ib03976
Panicum virgatum
Pavir.Ib03976
I
0.904
gene26043-v1.0-hybrid
Fragaria vesca
gene26043-v1.0-hybrid
I
0.904
SapurV1A.1146s0010
Salix purpurea
SapurV1A.1146s0010
I
0.904
anac058
Arabidopsis lyrata
Al_scaffold_0003_1942
I
0.904
anac058
Arabidopsis thaliana
AT3G18400
D
0.904
Bostr.19424s0822
Boechera stricta
Bostr.19424s0822
I
0.904
VIT_19s0014g02200
Vitis vinifera
VIT_19s0014g02200
I
0.903
POPTR_0001s40680
Populus trichocarpa
POPTR_0001s40680
I
0.903
SapurV1A.0207s0120
Salix purpurea
SapurV1A.0207s0120
I
0.903
BGIOSGA022861
Oryza indica
BGIOSGA022861
I
0.902
OGLUM06G14810
Oryza glumaepatula
OGLUM06G14810
I
0.902
OLONG_019251
Oryza longistaminata
OLONG_019251
I
0.902
OPUNC06G13130
Oryza punctata
OPUNC06G13130
I
0.902
OS06G0344900
Oryza sativa
OS06G0344900
I
0.902
ORUFI06G14810
Oryza rufipogon
ORUFI06G14810
I
0.902
ORGLA06G0124600
Oryza glaberrima
ORGLA06G0124600
I
0.902
ONIVA03G33370
Oryza nivara
ONIVA03G33370
I
0.902
OB06G22100
Oryza brachyantha
OB06G22100
I
0.902
Si036535m.g
Setaria italica
Si036535m.g
I
0.902
OBART06G13940
Oryza barthii
OBART06G13940
I
0.902
Eucgr.K02225
Eucalyptus grandis
Eucgr.K02225
I
0.901
Solyc06g069710.2
Solanum lycopersicum
Solyc06g069710.2
I
0.901
PDK_20s1323531g003
Phoenix dactylifera
PDK_20s1323531g003
I
0.901
PGSC0003DMG400033047
Solanum tuberosum
PGSC0003DMG400033047
I
0.901
LPERR06G12840
Leersia perrieri
LPERR06G12840
I
0.901
Gorai.013G171300
Gossypium raimondii
Gorai.013G171300
I
0.900
LjSGA_071377.1
Lotus japonicus
LjSGA_071377.1
I
0.900
Pavir.Ia01262
Panicum virgatum
Pavir.Ia01262
I
0.900
Gorai.006G060900
Gossypium raimondii
Gorai.006G060900
I
0.900
AMTR_s00010p00266320
Amborella trichopoda
AMTR_s00010p00266320
I
0.900
Lus10021659.g
Linum usitatissimum
Lus10021659.g
I
0.899
OPUNC03G24220
Oryza punctata
OPUNC03G24220
I
0.899
GLYMA12G26190
Glycine max
GLYMA12G26190
I
0.899
GLYMA06G35660
Glycine max
GLYMA06G35660
I
0.899
Lus10001648.g
Linum usitatissimum
Lus10001648.g
I
0.899
mgf021065m
Mimulus guttatus
mgf021065m
I
0.898
TCM_012350
Theobroma cacao
TCM_012350
I
0.897
Cucsa.122890
Cucumis sativus
Cucsa.122890
I
0.897
PGSC0003DMG400029593
Solanum tuberosum
PGSC0003DMG400029593
I
0.897
29974.m000235
Ricinus communis
29974.m000235
I
0.897
Cla023717
Citrullus lanatus
Cla023717
I
0.896
Cucsa.197830
Cucumis sativus
Cucsa.197830
I
0.896
Bo4g154590
Brassica oleracea
Bo4g154590
I
0.896
Solyc08g074300.2
Solanum lycopersicum
Solyc08g074300.2
I
0.896
Sb01g014310
Sorghum bicolor
Sb01g014310
I
0.896
Cla019391
Citrullus lanatus
Cla019391
I
0.895
Bo2g043280
Brassica oleracea
Bo2g043280
I
0.895
Bra022685
Brassica rapa
Bra022685
I
0.895
Traes_4BS_373BDBA94
Triticum aestivum
Traes_4BS_373BDBA94
I
0.895
mgf003818m
Mimulus guttatus
mgf003818m
I
0.895
SapurV1A.0719s0060
Salix purpurea
SapurV1A.0719s0060
I
0.895
mgf021404m
Mimulus guttatus
mgf021404m
I
0.895
GSMUA_Achr10G19900_001
Musa acuminata
GSMUA_Achr10G19900_001
I
0.894
GSMUA_Achr8G24680_001
Musa acuminata
GSMUA_Achr8G24680_001
I
0.894
orange1.1g017827m.g
Citrus sinensis
orange1.1g017827m.g
I
0.893
Traes_4AL_B44DF4ACC
Triticum aestivum
Traes_4AL_B44DF4ACC
I
0.893
TRIUR3_27612
Triticum urartu
TRIUR3_27612
I
0.893
F775_05949
Aegilops tauschii
F775_05949
I
0.893
Ciclev10020480m.g
Citrus clementina
Ciclev10020480m.g
I
0.893
GLYMA12G35530
Glycine max
GLYMA12G35530
I
0.892
BRADI1G14467
Brachypodium distachyon
BRADI1G14467
I
0.892
PGSC0003DMG400019523
Solanum tuberosum
PGSC0003DMG400019523
I
0.892
GLYMA13G34950
Glycine max
GLYMA13G34950
I
0.892
MLOC_68284
Hordeum vulgare
MLOC_68284
I
0.892
Pm015914
Prunus mume
Pm015914
I
0.891
POPTR_0015s02170
Populus trichocarpa
POPTR_0015s02170
I
0.891
AMTR_s00058p00136280
Amborella trichopoda
AMTR_s00058p00136280
I
0.890
Aquca_033_00035
Aquilegia coerulea
Aquca_033_00035
I
0.890
cassava46147.m1
Manihot esculenta
cassava46147.m1
I
0.890
MTR_2g078700
Medicago truncatula
MTR_2g078700
I
0.889
Ca_22532
Cicer arietinum
Ca_22532
I
0.889
gene00971-v1.0-hybrid
Fragaria vesca
gene00971-v1.0-hybrid
I
0.889
MLOC_68185
Hordeum vulgare
MLOC_68185
I
0.888
TRIUR3_20591
Triticum urartu
TRIUR3_20591
I
0.888
Solyc03g115850.2
Solanum lycopersicum
Solyc03g115850.2
I
0.888
F775_52293
Aegilops tauschii
F775_52293
I
0.888
Thhalv10011708m.g
Eutrema salsugineum
Thhalv10011708m.g
I
0.886
Ca_11021
Cicer arietinum
Ca_11021
I
0.886
orange1.1g018950m.g
Citrus sinensis
orange1.1g018950m.g
I
0.886
28649.m000212
Ricinus communis
28649.m000212
I
0.886
Ciclev10012093m.g
Citrus clementina
Ciclev10012093m.g
I
0.886
GRMZM2G393433
Zea mays
GRMZM2G393433
I
0.885
Si007886m.g
Setaria italica
Si007886m.g
I
0.885
GLYMA09G37050
Glycine max
GLYMA09G37050
I
0.885
Sb08g006330
Sorghum bicolor
Sb08g006330
I
0.885
VIT_14s0108g01070
Vitis vinifera
VIT_14s0108g01070
I
0.885
Pavir.J00978
Panicum virgatum
Pavir.J00978
I
0.885
cassava361.valid.m1
Manihot esculenta
cassava361.valid.m1
I
0.884
OB03G34470
Oryza brachyantha
OB03G34470
I
0.883
Bo1g117610
Brassica oleracea
Bo1g117610
I
0.883
Bra037585
Brassica rapa
Bra037585
I
0.883
Traes_5BL_657BF1497
Triticum aestivum
Traes_5BL_657BF1497
I
0.882
PRUPE_ppa007883mg
Prunus persica
PRUPE_ppa007883mg
I
0.882
Bostr.26675s0262
Boechera stricta
Bostr.26675s0262
I
0.882
gene04424-v1.0-hybrid
Fragaria vesca
gene04424-v1.0-hybrid
I
0.882
GLYMA13G05540
Glycine max
GLYMA13G05540
I
0.882
GSMUA_Achr8G18420_001
Musa acuminata
GSMUA_Achr8G18420_001
I
0.882
Aquca_002_00662
Aquilegia coerulea
Aquca_002_00662
I
0.881
cassava1758.valid.m1
Manihot esculenta
cassava1758.valid.m1
I
0.881
GRMZM2G008374
Zea mays
GRMZM2G008374
I
0.879
GLYMA18G49620
Glycine max
GLYMA18G49620
I
0.879
BRADI4G34157
Brachypodium distachyon
BRADI4G34157
I
0.879
chr4.CM0087.800.nd
Lotus japonicus
chr4.CM0087.800.nd
I
0.878
TCM_018621
Theobroma cacao
TCM_018621
I
0.878
Gorai.007G079900
Gossypium raimondii
Gorai.007G079900
I
0.877
cassava1757.valid.m1
Manihot esculenta
cassava1757.valid.m1
I
0.877
Cla017258
Citrullus lanatus
Cla017258
I
0.876
Lus10038937.g
Linum usitatissimum
Lus10038937.g
I
0.876
evm.TU.supercontig_14.101
Carica papaya
evm.TU.supercontig_14.101
I
0.874
cassava41252.m1
Manihot esculenta
cassava41252.m1
I
0.874
GLYMA06G21020
Glycine max
GLYMA06G21020
I
0.873
Cucsa.338700
Cucumis sativus
Cucsa.338700
I
0.873
Solyc12g036480.1
Solanum lycopersicum
Solyc12g036480.1
I
0.873
MDP0000276765
Malus domestica
MDP0000276765
I
0.872
Lus10027227.g
Linum usitatissimum
Lus10027227.g
I
0.872
OB09G21720
Oryza brachyantha
OB09G21720
I
0.872
PK23488.1
Cannabis sativa
PK23488.1
I
0.872
GSMUA_Achr6G01770_001
Musa acuminata
GSMUA_Achr6G01770_001
I
0.872
GLYMA19G02850
Glycine max
GLYMA19G02850
I
0.871