CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g017827m.g
(
Citrus sinensis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
orange1.1g017827m.g
T298653_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC100
M02377_2.00
Arabidopsis lyrata
DYACGYHANN
NNTDRCGTRH
PBM
Weirauch et al.(2014)
pTH9234
0.942
0.877
NAC100
M02375_2.00
Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH7239
0.939
0.877
ANAC080
M02376_2.00
Arabidopsis lyrata
NBAMKNHWNN
NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH9230
0.937
0.868
NAC079
M02373_2.00
Arabidopsis thaliana
TTGCGTRY
RYACGCAA
PBM
Weirauch et al.(2014)
pTH7399
0.936
0.868
NAC079
M07228_2.00
Arabidopsis thaliana
CBWNHNNHACACGYWA
TWRCGTGTDNNDNWVG
Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a
0.936
0.868
NAC079
M07229_2.00
Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH
DTWRCKTGWDNNDBAMGNWAN
Dap-seq
OMalley et al.(2016)
ANAC079_col
0.936
0.868
NAC92
M00979_2.00
Arabidopsis thaliana
NNDYACGBHA
TDVCGTRHNN
PBM
Lindemose et al.(2014)
ANAC092
0.928
0.833
NAC92
M00730_2.00
Arabidopsis thaliana
DYACGNHAN
NTDNCGTRH
PBM
Chang et al.(2013)
pTH7335
0.928
0.833
NAC92
M07234_2.00
Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY
RTWRCKTGHDNNDCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a
0.928
0.833
NAC92
M07235_2.00
Arabidopsis thaliana
WRCKTGTNNNDCAMG
CKTGHNNNACAMGYW
Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a
0.928
0.833
NAC59
M11080_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC059_01
0.923
0.825
ANAC038
M07188_2.00
Arabidopsis thaliana
DNCKTRHNNHDCAMGYWA
TWRCKTGHDNNDYAMGNH
Dap-seq
OMalley et al.(2016)
ANAC038_col_a
0.908
0.763
ANAC038
M07189_2.00
Arabidopsis thaliana
TTDCTTGWNNHDYAMGHHAHH
DDTDDCKTRHDNNWCAAGHAA
Dap-seq
OMalley et al.(2016)
ANAC038_colamp_a
0.908
0.763
anac058
M00886_2.00
Arabidopsis thaliana
CGTTGTCT
AGACAACG
PBM
Franco-Zorrilla et al.(2014)
ANAC58
0.902
0.798
anac058
M07210_2.00
Arabidopsis thaliana
CKTGHNNNRCAMGYWA
TWRCKTGYNNNDCAMG
Dap-seq
OMalley et al.(2016)
ANAC058_col_a
0.902
0.798
anac058
M07211_2.00
Arabidopsis thaliana
TDCKTGHNNNDCAMGHHA
TDDCKTGHNNNDCAMGHA
Dap-seq
OMalley et al.(2016)
ANAC058_colamp_a
0.902
0.798
NAC098
M07239_2.00
Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG
Dap-seq
OMalley et al.(2016)
CUC2_colamp_a
0.901
0.825
NAC098
M07240_2.00
Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN
Dap-seq
OMalley et al.(2016)
CUC2_col
0.901
0.825
NAC054
M07205_2.00
Arabidopsis thaliana
CKTVHNNHRCACGYHANCW
WGNTDRCGTGYDNNDBAMG
Dap-seq
OMalley et al.(2016)
CUC1_colamp_a
0.895
0.816
NAC054
M07206_2.00
Arabidopsis thaliana
TWNCKTGHNNNDCAMG
CKTGHNNNDCAMGNWA
Dap-seq
OMalley et al.(2016)
CUC1_col_v31
0.895
0.816
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g017827m
NAC/NAM
17
141
PPGFRFHPTDEELITHYLYKKVLDVCFSCRAIGDVDLNKNEPWELPWKAKMGEKEWYFFCMRDRKYPTGLRTNRATVSGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGEKSSWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Citrus sinensis
TFs
327 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R008377
Calypte anna
Aan_R008377
I
Aan_R011648
Calypte anna
Aan_R011648
I
Afo_R009212
Aptenodytes forsteri
Afo_R009212
I
Afo_R013442
Aptenodytes forsteri
Afo_R013442
I
Alligator_sinensis_CCG021829.1
Alligator sinensis
Alligator_sinensis_CCG021829.1
I
Alligator_sinensis_CCG021936.1
Alligator sinensis
Alligator_sinensis_CCG021936.1
I
Brh_R001747
Buceros rhinoceros
Brh_R001747
I
CapteG130381
Capitella teleta
CapteG130381
I
CGI_10007406
Crassostrea gigas
CGI_10007406
I
Cmyd_10002799
Chelonia mydas
Cmyd_10002799
I
Cmyd_10013638
Chelonia mydas
Cmyd_10013638
I
D915_14985
Fasciola hepatica
D915_14985
I
DAPPUDRAFT_213340
Daphnia pulex
DAPPUDRAFT_213340
I
HSF1
Anolis carolinensis
ENSACAG00000012604
I
ENSACAG00000013094
Anolis carolinensis
ENSACAG00000013094
I
ENSAMEG00000005847
Ailuropoda melanoleuca
ENSAMEG00000005847
I
ENSAMEG00000017238
Ailuropoda melanoleuca
ENSAMEG00000017238
I
ENSAMXG00000012942
Astyanax mexicanus
ENSAMXG00000012942
I
ENSAMXG00000020456
Astyanax mexicanus
ENSAMXG00000020456
I
ENSAPLG00000005338
Anas platyrhynchos
ENSAPLG00000005338
I
ENSAPLG00000007598
Anas platyrhynchos
ENSAPLG00000007598
I
HSF4
Bos taurus
ENSBTAG00000003514
I
HSF1
Bos taurus
ENSBTAG00000020751
I
ENSBTAP00000004568-D1
Bos grunniens
ENSBTAP00000004568-D1
I
HSF1
Canis familiaris
ENSCAFG00000001563
I
HSF4
Canis familiaris
ENSCAFG00000020379
I
HSF4
Callithrix jacchus
ENSCJAG00000016481
I
HSF1
Callithrix jacchus
ENSCJAG00000021431
I
HSF4
Cavia porcellus
ENSCPOG00000010834
I
HSF1
Cavia porcellus
ENSCPOG00000019305
I
ENSCSAG00000003768
Chlorocebus sabaeus
ENSCSAG00000003768
I
ENSCSAG00000008638
Chlorocebus sabaeus
ENSCSAG00000008638
I
hsf1
Danio rerio
ENSDARG00000008818
I
hsf4
Danio rerio
ENSDARG00000013251
I
HSF4
Dasypus novemcinctus
ENSDNOG00000032363
I
HSF1
Dasypus novemcinctus
ENSDNOG00000047071
I
Hsf1
Dipodomys ordii
ENSDORG00000002333
I
Hsf4
Dipodomys ordii
ENSDORG00000015128
I
HSF1
Equus caballus
ENSECAG00000000621
I
HSF4
Equus caballus
ENSECAG00000016708
I
HSF1
Echinops telfairi
ENSETEG00000002048
I
ENSFALG00000000369
Ficedula albicollis
ENSFALG00000000369
I
ENSFALG00000007632
Ficedula albicollis
ENSFALG00000007632
I
HSF1
Felis catus
ENSFCAG00000007722
I
HSF4
Felis catus
ENSFCAG00000014099
I
HSF4
Homo sapiens
ENSG00000102878
D
HSF1
Homo sapiens
ENSG00000185122
D
hsf1
Gasterosteus aculeatus
ENSGACG00000010434
I
hsf4
Gasterosteus aculeatus
ENSGACG00000013994
I
HSF4
Gallus gallus
ENSGALG00000003224
I
ENSGALG00000016429
Gallus gallus
ENSGALG00000016429
I
HSF4
Gorilla gorilla
ENSGGOG00000011899
I
HSF1
Gorilla gorilla
ENSGGOG00000013602
I
ENSGMOG00000000596
Gadus morhua
ENSGMOG00000000596
I
ENSGMOG00000019339
Gadus morhua
ENSGMOG00000019339
I
ENSLACG00000013265
Latimeria chalumnae
ENSLACG00000013265
I
HSF1
Loxodonta africana
ENSLAFG00000021374
I
HSF4
Loxodonta africana
ENSLAFG00000021984
I
ENSLOCG00000007411
Lepisosteus oculatus
ENSLOCG00000007411
I
ENSLOCG00000007976
Lepisosteus oculatus
ENSLOCG00000007976
I
ENSMEUG00000001857
Macropus eugenii
ENSMEUG00000001857
I
HSF4
Meleagris gallopavo
ENSMGAG00000000886
I
ENSMLUG00000002310
Myotis lucifugus
ENSMLUG00000002310
I
HSF4
Myotis lucifugus
ENSMLUG00000011083
I
ENSMLUG00000015849
Myotis lucifugus
ENSMLUG00000015849
I
ENSMLUG00000029200
Myotis lucifugus
ENSMLUG00000029200
I
HSF4
Macaca mulatta
ENSMMUG00000005906
I
HSF1
Macaca mulatta
ENSMMUG00000014728
I
HSF4
Monodelphis domestica
ENSMODG00000006228
I
HSF1
Monodelphis domestica
ENSMODG00000010663
I
ENSMPUG00000005418
Mustela putorius furo
ENSMPUG00000005418
I
ENSMPUG00000006704
Mustela putorius furo
ENSMPUG00000006704
I
Hsf1
Mus musculus
ENSMUSG00000022556
D
Hsf4
Mus musculus
ENSMUSG00000033249
I
ENSNLEG00000004338
Nomascus leucogenys
ENSNLEG00000004338
I
ENSNLEG00000010525
Nomascus leucogenys
ENSNLEG00000010525
I
HSF1
Ornithorhynchus anatinus
ENSOANG00000001941
I
ENSOANG00000002419
Ornithorhynchus anatinus
ENSOANG00000002419
N
ENSOARG00000002740
Ovis aries
ENSOARG00000002740
I
ENSOARG00000014186
Ovis aries
ENSOARG00000014186
I
HSF4
Oryctolagus cuniculus
ENSOCUG00000010001
I
HSF1
Oryctolagus cuniculus
ENSOCUG00000012921
I
HSF4
Otolemur garnettii
ENSOGAG00000001391
I
HSF1
Otolemur garnettii
ENSOGAG00000028708
I
ENSONIG00000010204
Oreochromis niloticus
ENSONIG00000010204
I
ENSONIG00000015330
Oreochromis niloticus
ENSONIG00000015330
I
HSF1
Ochotona princeps
ENSOPRG00000004863
I
HSF4
Ochotona princeps
ENSOPRG00000015074
I
hsf1
Oryzias latipes
ENSORLG00000001699
I
hsf4
Oryzias latipes
ENSORLG00000013768
I
ENSP00000332698
Macaca fascicularis
ENSP00000332698
I
ENSP00000332698-D1
Bos grunniens
ENSP00000332698-D1
I
ENSPANG00000005017
Papio anubis
ENSPANG00000005017
I
ENSPANG00000005938
Papio anubis
ENSPANG00000005938
I
HSF1
Procavia capensis
ENSPCAG00000006962
I
HSF4
Procavia capensis
ENSPCAG00000013012
I
ENSPFOG00000003038
Poecilia formosa
ENSPFOG00000003038
I
ENSPFOG00000004675
Poecilia formosa
ENSPFOG00000004675
I
ENSPMAG00000004630
Petromyzon marinus
ENSPMAG00000004630
I
ENSPPYG00000007441
Pongo abelii
ENSPPYG00000007441
I
ENSPPYG00000018969
Pongo abelii
ENSPPYG00000018969
I
ENSPSIG00000012111
Pelodiscus sinensis
ENSPSIG00000012111
I
ENSPSIG00000013559
Pelodiscus sinensis
ENSPSIG00000013559
I
HSF4
Pan troglodytes
ENSPTRG00000034007
I
HSF4
Pteropus vampyrus
ENSPVAG00000000402
I
HSF1
Pteropus vampyrus
ENSPVAG00000009267
I
Hsf4
Rattus norvegicus
ENSRNOG00000015253
I
Hsf1
Rattus norvegicus
ENSRNOG00000021732
I
ENSSHAG00000000079
Sarcophilus harrisii
ENSSHAG00000000079
I
ENSSHAG00000010769
Sarcophilus harrisii
ENSSHAG00000010769
I
HSF4
Sus scrofa
ENSSSCG00000002792
I
HSF1
Sus scrofa
ENSSSCG00000005917
I
ENSSTOG00000007173
Ictidomys tridecemlineatus
ENSSTOG00000007173
I
ENSSTOG00000027009
Ictidomys tridecemlineatus
ENSSTOG00000027009
I
HSF4
Taeniopygia guttata
ENSTGUG00000006716
I
ENSTGUG00000014996
Taeniopygia guttata
ENSTGUG00000014996
I
ENSTNIG00000002981
Tetraodon nigroviridis
ENSTNIG00000002981
I
hsf1
Tetraodon nigroviridis
ENSTNIG00000018157
I
hsf1
Takifugu rubripes
ENSTRUG00000000233
I
ENSTRUG00000000721
Takifugu rubripes
ENSTRUG00000000721
I
ENSTSYG00000006467
Tarsius syrichta
ENSTSYG00000006467
I
HSF1
Tursiops truncatus
ENSTTRG00000006426
I
HSF4
Tursiops truncatus
ENSTTRG00000010241
I
ENSXMAG00000001905
Xiphophorus maculatus
ENSXMAG00000001905
I
ENSXMAG00000005948
Xiphophorus maculatus
ENSXMAG00000005948
I
e_gw.6.354.1
Branchiostoma floridae
e_gw.6.354.1
I
Gfo_R015956
Geospiza fortis
Gfo_R015956
I
LotgiG214431
Lottia gigantea
LotgiG214431
I
Myotis_brandtii_FBXL8_10015042
Myotis brandtii
Myotis_brandtii_FBXL8_10015042
I
Myotis_brandtii_HSF1_10006459
Myotis brandtii
Myotis_brandtii_HSF1_10006459
I
Ogr05725
Ophisaurus gracilis
Ogr05725
I
Ogr12192
Ophisaurus gracilis
Ogr12192
I
Pvit_07213
Pogona vitticeps
Pvit_07213
I
Pvit_18730
Pogona vitticeps
Pvit_18730
I
Sakowv30012471m.g
Saccoglossus kowalevskii
Sakowv30012471m.g
I
SMAR008659
Strigamia maritima
SMAR008659
I
T265_09239
Opisthorchis viverrini
T265_09239
I
Tal_R010556
Tyto alba
Tal_R010556
I
Tal_R012818
Tyto alba
Tal_R012818
I
tetur02g00310
Tetranychus urticae
tetur02g00310
I
hsf1
Xenopus laevis
XB-GENE-997145
I
hsf1.S
Xenopus laevis
XB-GENE-997146
I
XP_002937220
Xenopus tropicalis
XP_002937220
I
XP_002942927
Xenopus tropicalis
XP_002942927
I