CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10015728m.g
(
Eutrema salsugineum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Thhalv10015728m.g
T299257_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10015728m
NAC/NAM
59
197
PKGVKFEPTDEEVIEHLEAKCGIDGLKPHVFIQDFICSSVNDINYTHPKNLPGVSKDGSSSFFFNKTEQAYPKGQRKRRRITPSGQKDETVRWRKTGKTKPVKLNGVQRGSKKFMVLYKSAKKGLKQEKYNWVMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Eutrema salsugineum
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
anac044
Arabidopsis lyrata
Al_scaffold_0003_51
N
0.969
anac085
Arabidopsis lyrata
Al_scaffold_0006_1351
I
0.964
anac044
Arabidopsis thaliana
AT3G01600
N
0.969
anac085
Arabidopsis thaliana
AT5G14490
I
0.979
Bostr.1460s0050
Boechera stricta
Bostr.1460s0050
N
0.965
Bostr.2902s0186
Boechera stricta
Bostr.2902s0186
I
0.979
Bra001000
Brassica rapa
Bra001000
N
0.903
Bra006257
Brassica rapa
Bra006257
I
0.968
Cagra.1561s0026
Capsella grandiflora
Cagra.1561s0026
N
0.969
Cagra.3166s0054
Capsella grandiflora
Cagra.3166s0054
I
0.979
Carubv10002665m.g
Capsella rubella
Carubv10002665m.g
I
0.979
Carubv10014004m.g
Capsella rubella
Carubv10014004m.g
N
0.969
cassava14633.m1
Manihot esculenta
cassava14633.m1
I
0.906
Cla004701
Citrullus lanatus
Cla004701
I
0.874
PK17141.1
Cannabis sativa
PK17141.1
I
0.880
Thhalv10022099m.g
Eutrema salsugineum
Thhalv10022099m.g
N
0.964
VIT_14s0066g00360
Vitis vinifera
VIT_14s0066g00360
I
0.873