CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10022099m.g
(
Eutrema salsugineum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Thhalv10022099m.g
T299286_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10022099m
NAC/NAM
56
196
PKGVKFEPTDEDIIEFLEAQCGVGGSEPHVLIEEFIRPVTEDVGINYTHPENLPGANKDGVSVFFFHKTVQAYGTGQRKRRKITPTCLSEEPVRWHKTGRTKPVLLDGVQRGCKKIMVLYKSARKGSKPEKSNWVLHQYHL
Links
Other
NAC/NAM
family TFs
Other
Eutrema salsugineum
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
anac044
Arabidopsis lyrata
Al_scaffold_0003_51
N
0.993
anac044
Arabidopsis thaliana
AT3G01600
N
0.993
Bostr.1460s0050
Boechera stricta
Bostr.1460s0050
N
0.993
Cagra.1561s0026
Capsella grandiflora
Cagra.1561s0026
N
0.993
Carubv10014004m.g
Capsella rubella
Carubv10014004m.g
N
0.989
Bostr.2902s0186
Boechera stricta
Bostr.2902s0186
I
0.987
anac085
Arabidopsis thaliana
AT5G14490
I
0.986
Cagra.3166s0054
Capsella grandiflora
Cagra.3166s0054
I
0.986
Carubv10002665m.g
Capsella rubella
Carubv10002665m.g
I
0.986
anac085
Arabidopsis lyrata
Al_scaffold_0006_1351
I
0.979
Bra001000
Brassica rapa
Bra001000
N
0.977
Bra006257
Brassica rapa
Bra006257
I
0.973
Thhalv10015728m.g
Eutrema salsugineum
Thhalv10015728m.g
N
0.964
cassava14633.m1
Manihot esculenta
cassava14633.m1
I
0.960
PK17141.1
Cannabis sativa
PK17141.1
I
0.956
VIT_14s0066g00360
Vitis vinifera
VIT_14s0066g00360
I
0.955
POPTR_0001s35490
Populus trichocarpa
POPTR_0001s35490
I
0.952
TCM_016984
Theobroma cacao
TCM_016984
I
0.951
Ciclev10015507m.g
Citrus clementina
Ciclev10015507m.g
I
0.948
Cla004701
Citrullus lanatus
Cla004701
I
0.944
Cucsa.011210
Cucumis sativus
Cucsa.011210
I
0.942
SapurV1A.0716s0010
Salix purpurea
SapurV1A.0716s0010
I
0.935
SapurV1A.1388s0020
Salix purpurea
SapurV1A.1388s0020
I
0.935
Gorai.006G034600
Gossypium raimondii
Gorai.006G034600
I
0.934
MTR_1g093670
Medicago truncatula
MTR_1g093670
I
0.930
Eucgr.J02254
Eucalyptus grandis
Eucgr.J02254
I
0.927
orange1.1g014310m.g
Citrus sinensis
orange1.1g014310m.g
I
0.925
Ciclev10031598m.g
Citrus clementina
Ciclev10031598m.g
I
0.921
29917.m002016
Ricinus communis
29917.m002016
I
0.920
MTR_1g093680
Medicago truncatula
MTR_1g093680
I
0.916
29738.m001046
Ricinus communis
29738.m001046
I
0.911
cassava12330.valid.m1
Manihot esculenta
cassava12330.valid.m1
I
0.911
Gorai.007G075300
Gossypium raimondii
Gorai.007G075300
I
0.911
GLYMA01G22510
Glycine max
GLYMA01G22510
I
0.909
Lus10003668.g
Linum usitatissimum
Lus10003668.g
N
0.908
PRUPE_ppa006948mg
Prunus persica
PRUPE_ppa006948mg
I
0.907
Pm015625
Prunus mume
Pm015625
I
0.905
SapurV1A.0304s0050
Salix purpurea
SapurV1A.0304s0050
I
0.904
SapurV1A.2846s0020
Salix purpurea
SapurV1A.2846s0020
I
0.904
chr2.CM0749.410.nc
Lotus japonicus
chr2.CM0749.410.nc
I
0.903
PK25812.1
Cannabis sativa
PK25812.1
I
0.902
GLYMA20G32690
Glycine max
GLYMA20G32690
I
0.901
Cla020673
Citrullus lanatus
Cla020673
I
0.901
Cucsa.283900
Cucumis sativus
Cucsa.283900
I
0.901
POPTR_0010s13980
Populus trichocarpa
POPTR_0010s13980
I
0.900
SOG1
Vitis vinifera
VIT_01s0011g02990
I
0.900
gene03875-v1.0-hybrid
Fragaria vesca
gene03875-v1.0-hybrid
I
0.899
GLYMA02G11140
Glycine max
GLYMA02G11140
I
0.898
SapurV1A.0079s0500
Salix purpurea
SapurV1A.0079s0500
I
0.898
MTR_7g033320
Medicago truncatula
MTR_7g033320
I
0.897
Lus10021708.g
Linum usitatissimum
Lus10021708.g
I
0.896
PDK_20s1306131g001
Phoenix dactylifera
PDK_20s1306131g001
I
0.896
POPTR_0008s11550
Populus trichocarpa
POPTR_0008s11550
I
0.893
MTR_5g053430
Medicago truncatula
MTR_5g053430
I
0.891
Solyc05g009840.2
Solanum lycopersicum
Solyc05g009840.2
I
0.889
cassava3690.m1
Manihot esculenta
cassava3690.m1
I
0.888
mgf012882m
Mimulus guttatus
mgf012882m
I
0.888
Si024889m.g
Setaria italica
Si024889m.g
I
0.887
TCM_011869
Theobroma cacao
TCM_011869
I
0.887
GLYMA19G08510
Glycine max
GLYMA19G08510
N
0.886
PGSC0003DMG400000809
Solanum tuberosum
PGSC0003DMG400000809
I
0.883
mgf018486m
Mimulus guttatus
mgf018486m
I
0.883
GLYMA16G07501
Glycine max
GLYMA16G07501
N
0.881
Pm029010
Prunus mume
Pm029010
I
0.881
Gorai.008G186300
Gossypium raimondii
Gorai.008G186300
I
0.881
GSMUA_Achr3G07330_001
Musa acuminata
GSMUA_Achr3G07330_001
I
0.878
GSMUA_Achr6G11230_001
Musa acuminata
GSMUA_Achr6G11230_001
I
0.878
Traes_6AL_C14335DC8
Triticum aestivum
Traes_6AL_C14335DC8
I
0.876
Bostr.12659s0396
Boechera stricta
Bostr.12659s0396
I
0.876
Aquca_054_00006
Aquilegia coerulea
Aquca_054_00006
I
0.871