CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE17311
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE17311
T302211_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE17311
Nuclear receptor
6
75
SKCAICLGVGDGFHFGAEACKACAAFFRRSISQKKTYACKEANSCDLVNNARYMCQSCRLFKCLEVGMNP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL006160
Aedes aegypti
AAEL006160
I
AAEL007040
Aedes aegypti
AAEL007040
I
AALB007752
Anopheles albimanus
AALB007752
I
AALB009220
Anopheles albimanus
AALB009220
I
Aan_R007315
Calypte anna
Aan_R007315
I
AARA004356
Anopheles arabiensis
AARA004356
I
AARA011332
Anopheles arabiensis
AARA011332
I
AATE002063
Anopheles atroparvus
AATE002063
I
ACEP16400
Atta cephalotes
ACEP16400
I
ACHR004078
Anopheles christyi
ACHR004078
I
ACYPI001442
Acyrthosiphon pisum
ACYPI001442
I
ACYPI006937
Acyrthosiphon pisum
ACYPI006937
I
ACYPI007541
Acyrthosiphon pisum
ACYPI007541
I
AEPI003479
Anopheles epiroticus
AEPI003479
I
Afo_R004888
Aptenodytes forsteri
Afo_R004888
I
AGAP002506
Anopheles gambiae
AGAP002506
I
Alligator_sinensis_CCG001676.1
Alligator sinensis
Alligator_sinensis_CCG001676.1
I
AMEM017856
Anopheles merus
AMEM017856
I
AMIN002518
Anopheles minimus
AMIN002518
I
Aqu1.210949
Amphimedon queenslandica
Aqu1.210949
I
ASTEI07771
Anopheles stephensi
ASTEI07771
I
ASTEI07959
Anopheles stephensi
ASTEI07959
I
BGIBMGA008906
Bombyx mori
BGIBMGA008906
I
BGIBMGA008970
Bombyx mori
BGIBMGA008970
I
Brh_R001637
Buceros rhinoceros
Brh_R001637
I
CapteG142159
Capitella teleta
CapteG142159
I
Cflo_03909--XP_394016.2_APIME
Camponotus floridanus
Cflo_03909--XP_394016.2_APIME
I
Cflo_03911--XP_394014.2_APIME
Camponotus floridanus
Cflo_03911--XP_394014.2_APIME
I
Cflo_03913--XP_394013.3_APIME
Camponotus floridanus
Cflo_03913--XP_394013.3_APIME
I
CGI_10005366
Crassostrea gigas
CGI_10005366
I
CLEC011122
Cimex lectularius
CLEC011122
I
Cmyd_10020455
Chelonia mydas
Cmyd_10020455
I
Cmyd_10020845
Chelonia mydas
Cmyd_10020845
I
Cmyd_10021516
Chelonia mydas
Cmyd_10021516
I
DAPPUDRAFT_290555
Daphnia pulex
DAPPUDRAFT_290555
I
DAPPUDRAFT_290557
Daphnia pulex
DAPPUDRAFT_290557
I
RUNX2
Anolis carolinensis
ENSACAG00000013003
I
RUNX3
Anolis carolinensis
ENSACAG00000017855
I
ENSAMEG00000005325
Ailuropoda melanoleuca
ENSAMEG00000005325
I
ENSAMEG00000009223
Ailuropoda melanoleuca
ENSAMEG00000009223
I
ENSAMEG00000010102
Ailuropoda melanoleuca
ENSAMEG00000010102
I
ENSAMXG00000000881
Astyanax mexicanus
ENSAMXG00000000881
I
ENSAMXG00000004048
Astyanax mexicanus
ENSAMXG00000004048
I
ENSAMXG00000012244
Astyanax mexicanus
ENSAMXG00000012244
I
ENSAMXG00000017349
Astyanax mexicanus
ENSAMXG00000017349
I
ENSAPLG00000007026
Anas platyrhynchos
ENSAPLG00000007026
I
ENSAPLG00000016439
Anas platyrhynchos
ENSAPLG00000016439
I
RUNX2
Bos taurus
ENSBTAG00000004104
I
RUNX1
Bos taurus
ENSBTAG00000004742
I
RUNX1
Canis familiaris
ENSCAFG00000009596
I
RUNX3
Canis familiaris
ENSCAFG00000012903
I
RUNX1
Callithrix jacchus
ENSCJAG00000002816
I
RUNX3
Callithrix jacchus
ENSCJAG00000020815
I
ENSCPOG00000000551
Cavia porcellus
ENSCPOG00000000551
I
ENSCPOG00000002684
Cavia porcellus
ENSCPOG00000002684
I
RUNX2
Cavia porcellus
ENSCPOG00000005277
I
ENSCSAG00000000947
Chlorocebus sabaeus
ENSCSAG00000000947
I
ENSCSAG00000008703
Chlorocebus sabaeus
ENSCSAG00000008703
I
ENSCSAG00000012528
Chlorocebus sabaeus
ENSCSAG00000012528
I
ENSCSAVG00000004072
Ciona savignyi
ENSCSAVG00000004072
I
runx2a
Danio rerio
ENSDARG00000040261
I
runx3
Danio rerio
ENSDARG00000052826
I
runx2b
Danio rerio
ENSDARG00000059233
I
RUNX1
Dasypus novemcinctus
ENSDNOG00000015041
I
RUNX2
Dasypus novemcinctus
ENSDNOG00000034361
I
RUNX3
Dasypus novemcinctus
ENSDNOG00000043493
I
Runx1
Dipodomys ordii
ENSDORG00000004347
I
RUNX1
Equus caballus
ENSECAG00000003462
I
RUNX2
Equus caballus
ENSECAG00000020875
I
RUNX2
Erinaceus europaeus
ENSEEUG00000009243
I
ENSFALG00000000025
Ficedula albicollis
ENSFALG00000000025
I
ENSFALG00000000470
Ficedula albicollis
ENSFALG00000000470
I
RUNX3
Felis catus
ENSFCAG00000000680
I
RUNX3
Homo sapiens
ENSG00000020633
D
RUNX2
Homo sapiens
ENSG00000124813
D
RUNX1
Homo sapiens
ENSG00000159216
D
runx3
Gasterosteus aculeatus
ENSGACG00000007301
I
ENSGACG00000011721
Gasterosteus aculeatus
ENSGACG00000011721
I
runx2b
Gasterosteus aculeatus
ENSGACG00000012322
I
RUNX1
Gasterosteus aculeatus
ENSGACG00000015276
I
RUNX1
Gallus gallus
ENSGALG00000016022
I
ENSGALG00000026821
Gallus gallus
ENSGALG00000026821
I
RUNX3
Gorilla gorilla
ENSGGOG00000004848
I
RUNX1
Gorilla gorilla
ENSGGOG00000012862
I
RUNX2
Gorilla gorilla
ENSGGOG00000012890
I
ENSGMOG00000010468
Gadus morhua
ENSGMOG00000010468
I
ENSGMOG00000014088
Gadus morhua
ENSGMOG00000014088
I
ENSGMOG00000019132
Gadus morhua
ENSGMOG00000019132
I
ENSLACG00000011545
Latimeria chalumnae
ENSLACG00000011545
I
ENSLACG00000013776
Latimeria chalumnae
ENSLACG00000013776
I
ENSLACG00000015930
Latimeria chalumnae
ENSLACG00000015930
I
RUNX1
Loxodonta africana
ENSLAFG00000004290
I
RUNX2
Loxodonta africana
ENSLAFG00000005054
I
RUNX3
Loxodonta africana
ENSLAFG00000008382
I
ENSLOCG00000002744
Lepisosteus oculatus
ENSLOCG00000002744
I
ENSLOCG00000010990
Lepisosteus oculatus
ENSLOCG00000010990
I
ENSLOCG00000015816
Lepisosteus oculatus
ENSLOCG00000015816
I
ENSMEUG00000014419
Macropus eugenii
ENSMEUG00000014419
I
RUNX1
Microcebus murinus
ENSMICG00000011998
I
RUNX3
Myotis lucifugus
ENSMLUG00000003395
I
RUNX1
Myotis lucifugus
ENSMLUG00000005802
I
RUNX1
Macaca mulatta
ENSMMUG00000001649
I
RUNX3
Macaca mulatta
ENSMMUG00000002420
I
RUNX2
Macaca mulatta
ENSMMUG00000019819
I
ENSMODG00000013941
Monodelphis domestica
ENSMODG00000013941
I
RUNX2
Monodelphis domestica
ENSMODG00000018912
I
RUNX1
Monodelphis domestica
ENSMODG00000021051
I
ENSMPUG00000001340
Mustela putorius furo
ENSMPUG00000001340
I
ENSMPUG00000012508
Mustela putorius furo
ENSMPUG00000012508
I
ENSMPUG00000015804
Mustela putorius furo
ENSMPUG00000015804
I
Runx1
Mus musculus
ENSMUSG00000022952
D
Runx2
Mus musculus
ENSMUSG00000039153
D
Runx3
Mus musculus
ENSMUSG00000070691
D
ENSNLEG00000003611
Nomascus leucogenys
ENSNLEG00000003611
I
ENSNLEG00000004310
Nomascus leucogenys
ENSNLEG00000004310
I
ENSOANG00000031074
Ornithorhynchus anatinus
ENSOANG00000031074
I
ENSOARG00000006421
Ovis aries
ENSOARG00000006421
I
ENSOARG00000010358
Ovis aries
ENSOARG00000010358
I
ENSOARG00000013599
Ovis aries
ENSOARG00000013599
I
RUNX1
Oryctolagus cuniculus
ENSOCUG00000013731
I
RUNX2
Otolemur garnettii
ENSOGAG00000003900
I
RUNX3
Otolemur garnettii
ENSOGAG00000025633
I
RUNX1
Otolemur garnettii
ENSOGAG00000033362
I
ENSONIG00000001025
Oreochromis niloticus
ENSONIG00000001025
I
ENSONIG00000001436
Oreochromis niloticus
ENSONIG00000001436
I
ENSONIG00000004914
Oreochromis niloticus
ENSONIG00000004914
I
ENSONIG00000008210
Oreochromis niloticus
ENSONIG00000008210
I
ENSOPRG00000000765
Ochotona princeps
ENSOPRG00000000765
I
RUNX2
Ochotona princeps
ENSOPRG00000002943
I
RUNX3
Ochotona princeps
ENSOPRG00000011273
I
runx2
Oryzias latipes
ENSORLG00000010169
I
runx3
Oryzias latipes
ENSORLG00000017515
I
ENSORLG00000018584
Oryzias latipes
ENSORLG00000018584
I
RUNX1
Oryzias latipes
ENSORLG00000020699
I
ENSP00000300305
Macaca fascicularis
ENSP00000300305
I
ENSP00000382800
Macaca fascicularis
ENSP00000382800
I
ENSP00000409227-D1
Bos grunniens
ENSP00000409227-D1
I
ENSPANG00000006186
Papio anubis
ENSPANG00000006186
I
ENSPANG00000007357
Papio anubis
ENSPANG00000007357
I
ENSPANG00000008140
Papio anubis
ENSPANG00000008140
I
RUNX1
Procavia capensis
ENSPCAG00000016747
I
ENSPFOG00000003997
Poecilia formosa
ENSPFOG00000003997
I
ENSPFOG00000008944
Poecilia formosa
ENSPFOG00000008944
I
ENSPFOG00000013752
Poecilia formosa
ENSPFOG00000013752
I
ENSPFOG00000016115
Poecilia formosa
ENSPFOG00000016115
I
ENSPPYG00000001714
Pongo abelii
ENSPPYG00000001714
I
ENSPPYG00000011394
Pongo abelii
ENSPPYG00000011394
I
ENSPPYG00000016664
Pongo abelii
ENSPPYG00000016664
I
ENSPSIG00000012728
Pelodiscus sinensis
ENSPSIG00000012728
I
ENSPSIG00000014293
Pelodiscus sinensis
ENSPSIG00000014293
I
ENSPSIG00000017547
Pelodiscus sinensis
ENSPSIG00000017547
I
RUNX3
Pan troglodytes
ENSPTRG00000000351
I
RUNX1
Pan troglodytes
ENSPTRG00000013883
I
RUNX2
Pan troglodytes
ENSPTRG00000018228
I
RUNX1
Pteropus vampyrus
ENSPVAG00000001606
I
Runx1
Rattus norvegicus
ENSRNOG00000001704
I
Runx2
Rattus norvegicus
ENSRNOG00000020193
I
Runx3
Rattus norvegicus
ENSRNOG00000054217
I
ENSSHAG00000009950
Sarcophilus harrisii
ENSSHAG00000009950
I
ENSSHAG00000014782
Sarcophilus harrisii
ENSSHAG00000014782
I
ENSSSCG00000012051
Sus scrofa
ENSSSCG00000012051
I
ENSSSCG00000025261
Sus scrofa
ENSSSCG00000025261
I
ENSSTOG00000010163
Ictidomys tridecemlineatus
ENSSTOG00000010163
I
ENSSTOG00000022471
Ictidomys tridecemlineatus
ENSSTOG00000022471
I
RUNX3
Taeniopygia guttata
ENSTGUG00000001130
I
ENSTGUG00000004719
Taeniopygia guttata
ENSTGUG00000004719
I
RUNX2
Taeniopygia guttata
ENSTGUG00000013249
I
runx2b
Tetraodon nigroviridis
ENSTNIG00000009685
I
runx3
Tetraodon nigroviridis
ENSTNIG00000016911
I
ENSTNIG00000018690
Tetraodon nigroviridis
ENSTNIG00000018690
I
runx3
Takifugu rubripes
ENSTRUG00000001517
I
runx2
Takifugu rubripes
ENSTRUG00000003501
I
runx1
Takifugu rubripes
ENSTRUG00000012611
I
ENSTSYG00000005097
Tarsius syrichta
ENSTSYG00000005097
I
RUNX2
Tursiops truncatus
ENSTTRG00000006943
I
RUNX3
Tursiops truncatus
ENSTTRG00000009396
I
RUNX1
Tursiops truncatus
ENSTTRG00000014160
I
ENSXMAG00000003400
Xiphophorus maculatus
ENSXMAG00000003400
I
ENSXMAG00000004396
Xiphophorus maculatus
ENSXMAG00000004396
I
ENSXMAG00000006715
Xiphophorus maculatus
ENSXMAG00000006715
I
ENSXMAG00000018835
Xiphophorus maculatus
ENSXMAG00000018835
I
estExt_fgenesh2_kg.C_3770001
Branchiostoma floridae
estExt_fgenesh2_kg.C_3770001
I
estExt_fgenesh2_kg.C_750001
Branchiostoma floridae
estExt_fgenesh2_kg.C_750001
I
lz
Drosophila melanogaster
FBgn0002576
D
GA13742
Drosophila pseudoobscura
FBgn0073778
I
RunxA
Drosophila melanogaster
FBgn0083981
I
GF15967
Drosophila ananassae
FBgn0092990
I
GF15983
Drosophila ananassae
FBgn0093006
I
GG17578
Drosophila erecta
FBgn0109803
I
GG18309
Drosophila erecta
FBgn0110525
I
GG19691
Drosophila erecta
FBgn0111893
I
GH17737
Drosophila grimshawi
FBgn0125207
I
GH17774
Drosophila grimshawi
FBgn0125244
I
GI14398
Drosophila mojavensis
FBgn0137150
I
GI15119
Drosophila mojavensis
FBgn0137869
I
GL15800
Drosophila persimilis
FBgn0153404
I
GL15927
Drosophila persimilis
FBgn0153531
I
GL16499
Drosophila persimilis
FBgn0154103
I
GM22478
Drosophila sechellia
FBgn0177348
I
GM22662
Drosophila sechellia
FBgn0177532
I
GM23044
Drosophila sechellia
FBgn0177912
I
GD17495
Drosophila simulans
FBgn0189047
I
GJ18742
Drosophila virilis
FBgn0205894
I
GJ18917
Drosophila virilis
FBgn0206063
I
GJ19245
Drosophila virilis
FBgn0206390
I
GK19810
Drosophila willistoni
FBgn0221808
I
GK20052
Drosophila willistoni
FBgn0222049
I
GK25373
Drosophila willistoni
FBgn0227332
I
GE15340
Drosophila yakuba
FBgn0232921
I
GE17788
Drosophila yakuba
FBgn0235232
I
GE17890
Drosophila yakuba
FBgn0235328
I
GA22609
Drosophila pseudoobscura
FBgn0244012
I
GA25684
Drosophila pseudoobscura
FBgn0247061
I
RunxB
Drosophila melanogaster
FBgn0259162
I
GB52718
Apis mellifera
GB52718
I
GB52719
Apis mellifera
GB52719
I
GB52721
Apis mellifera
GB52721
I
GB52761
Apis mellifera
GB52761
I
Gfo_R011596
Geospiza fortis
Gfo_R011596
I
HMEL009843
Heliconius melpomene
HMEL009843
I
Hsal_04635--XP_394013.3_APIME
Harpegnathos saltator
Hsal_04635--XP_394013.3_APIME
I
Hsal_12319--XP_394016.2_APIME
Harpegnathos saltator
Hsal_12319--XP_394016.2_APIME
I
Hsal_12322--XP_394014.2_APIME
Harpegnathos saltator
Hsal_12322--XP_394014.2_APIME
I
ISCW004493
Ixodes scapularis
ISCW004493
I
KGM_21067
Danaus plexippus
KGM_21067
I
KGM_21075
Danaus plexippus
KGM_21075
I
L798_10922
Zootermopsis nevadensis
L798_10922
I
LDEC006645
Leptinotarsa decemlineata
LDEC006645
I
LLOJ002049
Lutzomyia longipalpis
LLOJ002049
I
LLOJ002717
Lutzomyia longipalpis
LLOJ002717
I
LotgiG96224
Lottia gigantea
LotgiG96224
I
MCINX000302
Melitaea cinxia
MCINX000302
I
MCINX005905
Melitaea cinxia
MCINX005905
I
MCINX005906
Melitaea cinxia
MCINX005906
I
MDOA010744
Musca domestica
MDOA010744
I
MDOA011942
Musca domestica
MDOA011942
I
MDOA013149
Musca domestica
MDOA013149
I
MESCA007078
Megaselia scalaris
MESCA007078
I
ML03045a
Mnemiopsis leidyi
ML03045a
I
Myotis_brandtii_RUNX2_10026084
Myotis brandtii
Myotis_brandtii_RUNX2_10026084
I
NEMVEDRAFT_v1g129231
Nematostella vectensis
NEMVEDRAFT_v1g129231
I
NV10998
Nasonia vitripennis
NV10998
I
NV11000
Nasonia vitripennis
NV11000
I
NV17759
Nasonia vitripennis
NV17759
I
NV17793
Nasonia vitripennis
NV17793
I
Ogr17914
Ophisaurus gracilis
Ogr17914
I
PHUM333300
Pediculus humanus
PHUM333300
I
PHUM333320
Pediculus humanus
PHUM333320
I
PHUM333340
Pediculus humanus
PHUM333340
I
PPAI006591
Phlebotomus papatasi
PPAI006591
I
PPAI010986
Phlebotomus papatasi
PPAI010986
I
Pvit_01165
Pogona vitticeps
Pvit_01165
I
Pvit_04762
Pogona vitticeps
Pvit_04762
I
Pvit_17193
Pogona vitticeps
Pvit_17193
I
RPRC005391
Rhodnius prolixus
RPRC005391
I
Sakowv30005496m.g
Saccoglossus kowalevskii
Sakowv30005496m.g
I
SINV13317
Solenopsis invicta
SINV13317
I
SINV13356
Solenopsis invicta
SINV13356
I
SINV13363
Solenopsis invicta
SINV13363
I
SPU_006917
Strongylocentrotus purpuratus
SPU_006917
I
SPU_007852
Strongylocentrotus purpuratus
SPU_007852
I
TC005566
Tribolium castaneum
TC005566
I
TC005796
Tribolium castaneum
TC005796
I
TC006536
Tribolium castaneum
TC006536
I
TC006542
Tribolium castaneum
TC006542
I
tetur01g02340
Tetranychus urticae
tetur01g02340
I
TriadG25179
Trichoplax adhaerens
TriadG25179
I
runx2
Xenopus tropicalis
XB-GENE-482021
I
runx3
Xenopus tropicalis
XB-GENE-487784
I
runx3.L
Xenopus laevis
XB-GENE-6487158
I
runx2.L
Xenopus laevis
XB-GENE-864817
I
runx1.L
Xenopus laevis
XB-GENE-864949
I
XP_002165633.1
Hydra magnipapillata
XP_002165633.1
I
XP_002939386
Xenopus tropicalis
XP_002939386
I
XP_002939387
Xenopus tropicalis
XP_002939387
I
XP_002939388
Xenopus tropicalis
XP_002939388
I
YQE_12216
Dendroctonus ponderosae
YQE_12216
I
YQE_12218
Dendroctonus ponderosae
YQE_12218
I