CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFCAG00000026823
(
Felis catus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
ENSFCAG00000026823
T303194_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NR3C1
M03366_2.00
Homo sapiens
NRGWACAYNRTGTWCYH
DRGWACAYNRTGTWCYN
SELEX
Jolma et al.(2013)
NR3C1_1
0.648
1.000
NR3C1
M05587_2.00
Homo sapiens
RGDACAYWDTGTHCY
RGDACAHWRTGTHCY
SELEX
Yin et al.(2017)
NR3C1_eDBD_HT-SELEX
0.648
1.000
Nr3c1
M05886_2.00
Mus musculus
DGDACDBYNTGTNCY
RGNACANRVHGTHCH
SMiLE-seq
Isakova et al.(2017)
GR
0.648
1.000
NR3C1
M07986_2.00
Homo sapiens
DGNACABYBTGTNC
GNACAVRVTGTNCH
ChIP-seq
Gerstein et al.(2012)
A549_GR_HudsonAlpha
0.648
1.000
NR3C1
M07987_2.00
Homo sapiens
NNNNRGNACAYBBTGTHCYNN
NNRGDACAVVRTGTNCYNNNN
ChIP-seq
Gerstein et al.(2012)
ECC-1_GR_HudsonAlpha
0.648
1.000
NR3C1
M09270_2.00
Homo sapiens
DGNACABKNTGTNCY
RGNACANMVTGTNCH
Misc
Kulakovskiy et al.(2013)
GCR_HUMAN.H11MO.0.A
0.648
1.000
Nr3c1
M09318_2.00
Mus musculus
RGNACABYNTGTNCY
RGNACANRVTGTNCY
Misc
Kulakovskiy et al.(2013)
GCR_MOUSE.H11MO.0.A
0.648
1.000
NR3C1
M09607_2.00
Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN
Misc
Heinz et al.(2010)
A549-GR_GSE32465
0.648
1.000
Nr3c1
M09614_2.00
Mus musculus
NRGDACABNNTGTNC
GNACANNVTGTHCYN
Misc
Heinz et al.(2010)
RAW264.7-GRE_Unpublished
0.648
1.000
NR3C1
M11119_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_01
0.648
1.000
NR3C1
M11120_2.00
Homo sapiens
KKYACMRDVTGTYCTK
MAGRACABHYKGTRMM
Transfac
Matys et al.(2006)
V$GRE_C
0.648
1.000
NR3C1
M11121_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q4
0.648
1.000
NR3C1
M11122_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q6_01
0.648
1.000
NR3C1
M11123_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q6_02
0.648
1.000
NR3C1
M11124_2.00
Homo sapiens
NNWGVACANWDNNDNBHNN
NNDVNHNNHWNTGTBCWNN
Transfac
Matys et al.(2006)
V$GR_Q6
0.648
1.000
NR3C1
M11125_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR3C1_04
0.648
1.000
NR3C1
M05588_2.00
Homo sapiens
RGDACANDRYGTHCY
RGDACRYHNTGTHCY
SELEX
Yin et al.(2017)
NR3C1_eDBD_Methyl-HT-SELEX
0.648
1.000
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000019629
Nuclear receptor
422
453
KLCLVCSDEASGCHYGVLTCGSCKVFFKRAVE
Links
Other
Nuclear receptor
family TFs
Other
Felis catus
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AACERI_AaceriAFR096W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFR096W
I
AGOS_AFR096W
Ashbya gossypii
AGOS_AFR096W
I
Ecym_6340
Eremothecium cymbalariae
Ecym_6340
I
KLTH0D03564g
Lachancea thermotolerans
KLTH0D03564g
I
KLTH0D03564g
Kluyveromyces thermotolerans
KLTH0D03564g
I
NDAI_0G05530
Naumovozyma dairenensis
NDAI_0G05530
N
PAS_chr4_0540
Komagataella pastoris
PAS_chr4_0540
I
PVAR5_1982
Byssochlamys spectabilis
PVAR5_1982
N
SAKL0D05654g
Lachancea kluyveri
SAKL0D05654g
I
Scas_Contig711.31
Saccharomyces castellii
Scas_Contig711.31
N
TPHA_0I02820
Tetrapisispora phaffii
TPHA_0I02820
I
XP_002493979.1
Pichia pastoris
XP_002493979.1
I