Nr3c1 (Mus musculus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSMUSG00000024431 T303921_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nr3c1
M05886_2.00		 Mus musculus
DGDACDBYNTGTNCY
RGNACANRVHGTHCH		 SMiLE-seq
Isakova et al.(2017)
GR		 (Direct) (Direct)
Nr3c1
M09318_2.00		 Mus musculus
RGNACABYNTGTNCY
RGNACANRVTGTNCY		 Misc
Kulakovskiy et al.(2013)
GCR_MOUSE.H11MO.0.A		 (Direct) (Direct)
Nr3c1
M09614_2.00		 Mus musculus
NRGDACABNNTGTNC
GNACANNVTGTHCYN		 Misc
Heinz et al.(2010)
RAW264.7-GRE_Unpublished		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR3C1
M03366_2.00 		Homo sapiens
NRGWACAYNRTGTWCYH
DRGWACAYNRTGTWCYN		 SELEX
Jolma et al.(2013)
NR3C1_1 		0.993 1.000
NR3C1
M05587_2.00 		Homo sapiens
RGDACAYWDTGTHCY
RGDACAHWRTGTHCY		 SELEX
Yin et al.(2017)
NR3C1_eDBD_HT-SELEX 		0.993 1.000
NR3C1
M07986_2.00 		Homo sapiens
DGNACABYBTGTNC
GNACAVRVTGTNCH		 ChIP-seq
Gerstein et al.(2012)
A549_GR_HudsonAlpha 		0.993 1.000
NR3C2
M02395_2.00 		Homo sapiens
NNRGDACAN
NTGTHCYNN		 PBM
Weirauch et al.(2014)
pTH5924 		0.991 0.929
NR3C1
M07987_2.00 		Homo sapiens
NNNNRGNACAYBBTGTHCYNN
NNRGDACAVVRTGTNCYNNNN		 ChIP-seq
Gerstein et al.(2012)
ECC-1_GR_HudsonAlpha 		0.993 1.000
NR3C2
M03382_2.00 		Homo sapiens
NRGDACAHDRTGTHCYN
NRGDACAYHDTGTHCYN		 SELEX
Jolma et al.(2013)
NR3C2_1 		0.991 0.929
NR3C1
M09270_2.00 		Homo sapiens
DGNACABKNTGTNCY
RGNACANMVTGTNCH		 Misc
Kulakovskiy et al.(2013)
GCR_HUMAN.H11MO.0.A 		0.993 1.000
NR3C2
M05637_2.00 		Homo sapiens
NGNACRNNNYGTNCN
NGNACRNNNYGTNCN		 SELEX
Yin et al.(2017)
NR3C2_eDBD_HT-SELEX 		0.991 0.929
NR3C1
M09607_2.00 		Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN		 Misc
Heinz et al.(2010)
A549-GR_GSE32465 		0.993 1.000
NR3C2
M05638_2.00 		Homo sapiens
NGNACRNNVYGTNCN
NGNACRBNNYGTNCN		 SELEX
Yin et al.(2017)
NR3C2_eDBD_Methyl-HT-SELEX 		0.991 0.929
NR3C1
M11119_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_01 		0.993 1.000
NR3C1
M11120_2.00 		Homo sapiens
KKYACMRDVTGTYCTK
MAGRACABHYKGTRMM		 Transfac
Matys et al.(2006)
V$GRE_C 		0.993 1.000
NR3C1
M11121_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_Q4 		0.993 1.000
NR3C1
M11122_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_Q6_01 		0.993 1.000
NR3C1
M11123_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_Q6_02 		0.993 1.000
NR3C1
M11124_2.00 		Homo sapiens
NNWGVACANWDNNDNBHNN
NNDVNHNNHWNTGTBCWNN		 Transfac
Matys et al.(2006)
V$GR_Q6 		0.993 1.000
NR3C1
M11125_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR3C1_04 		0.993 1.000
NR3C1
M05588_2.00 		Homo sapiens
RGDACANDRYGTHCY
RGDACRYHNTGTHCY		 SELEX
Yin et al.(2017)
NR3C1_eDBD_Methyl-HT-SELEX 		0.993 1.000
PGR
M03923_2.00 		Homo sapiens
DGNACANNNYGTNCY
RGNACRNNNTGTNCH		 SELEX
Nitta et al.(2015)
PGR_1 		0.989 0.886
PGR
M09266_2.00 		Homo sapiens
RGNACWBYBTGTNCYN
NRGNACAVRVWGTNCY		 Misc
Kulakovskiy et al.(2013)
PRGR_HUMAN.H11MO.0.A 		0.989 0.886
Pgr
M09326_2.00 		Mus musculus
RGNACWBYNTGTNCY
RGNACANRVWGTNCY		 Misc
Kulakovskiy et al.(2013)
PRGR_MOUSE.H11MO.0.A 		0.989 0.886
PGR
M09603_2.00 		Homo sapiens
RNACWNNNWGTNCHN
NDGNACWNNNWGTNY		 Misc
Heinz et al.(2010)
T47D-PR_GSE31130 		0.989 0.886
PGR
M11095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PR_01 		0.989 0.886
PGR
M11096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PR_02 		0.989 0.886
PGR
M11097_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PR_Q6 		0.989 0.886
Ar
M00821_2.00 		Mus musculus
NRRGAACAYN
NRTGTTCYYN		 PBM
Weirauch et al.(2013)
pTH1739 		0.974 0.771
AR
M03389_2.00 		Homo sapiens
DRGWACRHVDYGTWCCY
RGGWACRHBDYGTWCYH		 SELEX
Jolma et al.(2013)
AR_1 		0.974 0.771
AR
M03390_2.00 		Homo sapiens
DRGWACAYNRTGTWCYY
RRGWACAYNRTGTWCYH		 SELEX
Jolma et al.(2013)
AR_2 		0.974 0.771
Ar
M03436_2.00 		Mus musculus
NRGHACAYNVYGTWCYN
NRGWACRBNRTGTDCYN		 SELEX
Jolma et al.(2013)
Ar_1 		0.974 0.771
AR
M09288_2.00 		Homo sapiens
DRYAAAYADNNNRGNACA
TGTNCYNNNHTRTTTRYH		 Misc
Kulakovskiy et al.(2013)
ANDR_HUMAN.H11MO.0.A 		0.974 0.771
Ar
M09331_2.00 		Mus musculus
NRGNACABRVTGTNCY
RGNACABYVTGTNCYN		 Misc
Kulakovskiy et al.(2013)
ANDR_MOUSE.H11MO.0.A 		0.974 0.771
AR
M09610_2.00 		Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN		 Misc
Heinz et al.(2010)
LNCAP-AR_GSE27824 		0.974 0.771
AR
M09609_2.00 		Homo sapiens
SHDRGVACAS
STGTBCYHDS		 Misc
Heinz et al.(2010)
LNCaP-AR_GSE27824 		0.974 0.771
AR
M11157_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_01 		0.974 0.771
AR
M11158_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_02 		0.974 0.771
AR
M11159_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_03 		0.974 0.771
AR
M11160_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_04 		0.974 0.771
AR
M11161_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_11 		0.974 0.771
AR
M11162_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_13 		0.974 0.771
AR
M11163_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_14_H 		0.974 0.771
AR
M11164_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_Q2 		0.974 0.771
AR
M11165_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_Q6_01 		0.974 0.771
AR
M11166_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_Q6 		0.974 0.771
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000025300 Nuclear receptor 435 504
ENSMUSP00000095199 Nuclear receptor 435 505
ENSMUSP00000111229 Nuclear receptor 435 504
ENSMUSP00000111233 Nuclear receptor 435 504
ENSMUSP00000120082 Nuclear receptor 435 488

Links

Other Nuclear receptor family TFs
Other Mus musculus TFs

273 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_150877 Agaricus bisporus AGABI2DRAFT_150877 N
BOTBODRAFT_99872 Botryobasidium botryosum BOTBODRAFT_99872 N
CERSUDRAFT_119121 Ceriporiopsis subvermispora CERSUDRAFT_119121 N
CY34DRAFT_468895 Suillus luteus CY34DRAFT_468895 N
DACRYDRAFT_114563 Dacryopinax sp DACRYDRAFT_114563 N
estExt_fgenesh2_pm.C_30290 Heterobasidion annosum estExt_fgenesh2_pm.C_30290 N
FOMPIDRAFT_1034579 Fomitopsis pinicola FOMPIDRAFT_1034579 N
GALMADRAFT_97916 Galerina marginata GALMADRAFT_97916 N
GLOTRDRAFT_120398 Gloeophyllum trabeum GLOTRDRAFT_120398 N
HETIRDRAFT_476261 Heterobasidion irregulare HETIRDRAFT_476261 N
JAAARDRAFT_35324 Jaapia argillacea JAAARDRAFT_35324 N
K443DRAFT_662219 Laccaria amethystina K443DRAFT_662219 N
LACBIDRAFT_313642 Laccaria bicolor LACBIDRAFT_313642 N
M404DRAFT_995995 Pisolithus tinctorius M404DRAFT_995995 N
M407DRAFT_20239 Tulasnella calospora M407DRAFT_20239 N
M408DRAFT_328654 Serendipita vermifera M408DRAFT_328654 N
M413DRAFT_446301 Hebeloma cylindrosporum M413DRAFT_446301 N
M422DRAFT_173033 Sphaerobolus stellatus M422DRAFT_173033 N
Moror_6251 Moniliophthora roreri Moror_6251 N
PAXRUDRAFT_825716 Paxillus rubicundulus PAXRUDRAFT_825716 N
PHACADRAFT_174788 Phanerochaete carnosa PHACADRAFT_174788 N
PHLGIDRAFT_99458 Phlebiopsis gigantea PHLGIDRAFT_99458 N
PILCRDRAFT_824046 Piloderma croceum PILCRDRAFT_824046 N
PISMIDRAFT_28197 Pisolithus microcarpus PISMIDRAFT_28197 N
PLEOSDRAFT_1112903 Pleurotus ostreatus PLEOSDRAFT_1112903 N
POSPLDRAFT_104953 Postia placenta POSPLDRAFT_104953 N
POSPLDRAFT_104955 Postia placenta POSPLDRAFT_104955 N
SCHCODRAFT_83015 Schizophyllum commune SCHCODRAFT_83015 N
SCLCIDRAFT_13363 Scleroderma citrinum SCLCIDRAFT_13363 N
SERLA73DRAFT_122259 Serpula lacrymans SERLA73DRAFT_122259 N
V565_091980 Rhizoctonia solani V565_091980 N