CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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dsf
(
Drosophila melanogaster
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
FBgn0015381
T305283_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dsf
M06431_2.00
Drosophila melanogaster
AAAAGTCANH
DNTGACTTTT
B1H
Zhu et al.(2011)
dsf_SANGER_5_FBgn0015381
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NR2E1
M02394_2.00
Homo sapiens
NGAGGTCARN
NYTGACCTCN
PBM
Weirauch et al.(2014)
pTH6281
0.937
0.800
Nr2e1
M00814_2.00
Mus musculus
NNNGTYRNNN
NNNYRACNNN
PBM
Weirauch et al.(2013)
pTH2936
0.937
0.800
A1YGC6_PANPA
M02421_2.00
Pan paniscus
NNGTCANNN
NNNTGACNN
PBM
Weirauch et al.(2014)
pTH5561
0.937
0.800
NR2E1
M03364_2.00
Homo sapiens
WDAAGTCAA
TTGACTTHW
SELEX
Jolma et al.(2013)
NR2E1_1
0.937
0.800
NR2E1
M03365_2.00
Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY
SELEX
Jolma et al.(2013)
NR2E1_2
0.937
0.800
Nr2e1
M03427_2.00
Mus musculus
WDAAGTCAW
WTGACTTHW
SELEX
Jolma et al.(2013)
Nr2e1_1
0.937
0.800
Nr2e1
M03428_2.00
Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY
SELEX
Jolma et al.(2013)
Nr2e1_2
0.937
0.800
NR2E1
M05585_2.00
Homo sapiens
NNAAGTCAN
NTGACTTNN
SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX
0.937
0.800
NR2E1
M05586_2.00
Homo sapiens
NDAAGTCAN
NTGACTTHN
SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX
0.937
0.800
tll
M02408_2.00
Drosophila melanogaster
NRASGTCAANNN
NNNTTGACSTYN
PBM
Weirauch et al.(2014)
pTH5714
0.871
0.743
tll
M03932_2.00
Drosophila melanogaster
NRAGTCAAAAGTCA
TGACTTTTGACTYN
SELEX
Nitta et al.(2015)
tll_1
0.871
0.743
tll
M03933_2.00
Drosophila melanogaster
NRAGTCAADAAGTCA
TGACTTHTTGACTYN
SELEX
Nitta et al.(2015)
tll_2
0.871
0.743
tll
M06558_2.00
Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW
B1H
Mathelier et al.(2014)
MA0459.1
0.871
0.743
tll
M06424_2.00
Drosophila melanogaster
AAAGTYA
TRACTTT
B1H
Zhu et al.(2011)
tll_FlyReg_FBgn0003720
0.871
0.743
tll
M06425_2.00
Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW
B1H
Zhu et al.(2011)
tll_NAR_FBgn0003720
0.871
0.743
tll
M09688_2.00
Drosophila melanogaster
MAAAGTCAAH
DTTGACTTTK
Misc
Kulakovskiy et al.(2009)
tll
0.871
0.743
tll
M11190_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TLL_Q6
0.871
0.743
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0078776
Nuclear receptor
11
84
IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLAKCFQSAMNK
FBpp0305445
Nuclear receptor
11
84
IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLAKCFQSAMNK
Links
Other
Nuclear receptor
family TFs
Other
Drosophila melanogaster
TFs
301 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL000181
Aedes aegypti
AAEL000181
N
AALB009551
Anopheles albimanus
AALB009551
N
AARA006496
Anopheles arabiensis
AARA006496
N
AATE004647
Anopheles atroparvus
AATE004647
N
ACEP25803
Atta cephalotes
ACEP25803
N
ACHR006211
Anopheles christyi
ACHR006211
N
ACOM033657
Anopheles coluzzii
ACOM033657
N
ACUA025632
Anopheles culicifacies
ACUA025632
N
ACYPI001480
Acyrthosiphon pisum
ACYPI001480
N
ADAC005840
Anopheles darlingi
ADAC005840
N
ADIR010123
Anopheles dirus
ADIR010123
N
AEPI009418
Anopheles epiroticus
AEPI009418
N
AFAF001135
Anopheles farauti
AFAF001135
N
AFUN001272
Anopheles funestus
AFUN001272
N
AGAP001099
Anopheles gambiae
AGAP001099
N
AMAM022417
Anopheles maculatus
AMAM022417
N
AMEC012325
Anopheles melas
AMEC012325
N
AMEM003228
Anopheles merus
AMEM003228
N
AMIN002364
Anopheles minimus
AMIN002364
N
AQUA001810
Anopheles quadriannulatus
AQUA001810
N
ASIS018375
Anopheles sinensis
ASIS018375
N
ASTEI10740
Anopheles stephensi
ASTEI10740
N
BGIBMGA010711
Bombyx mori
BGIBMGA010711
N
Cflo_01038--XP_625055.2_APIME
Camponotus floridanus
Cflo_01038--XP_625055.2_APIME
N
CPIJ007271
Culex quinquefasciatus
CPIJ007271
N
CpipJ_CPIJ007271
Culex pipiens
CpipJ_CPIJ007271
N
DAPPUDRAFT_304382
Daphnia pulex
DAPPUDRAFT_304382
N
ECPE_0001508301
Echinostoma caproni
ECPE_0001508301
N
polybromo
Drosophila melanogaster
FBgn0039227
N
GA10956
Drosophila pseudoobscura
FBgn0071012
N
GF23180
Drosophila ananassae
FBgn0100174
N
GG12321
Drosophila erecta
FBgn0104611
N
GH18462
Drosophila grimshawi
FBgn0125929
N
GI24041
Drosophila mojavensis
FBgn0146764
N
GL13862
Drosophila persimilis
FBgn0151467
N
GM22062
Drosophila sechellia
FBgn0176933
N
GJ23670
Drosophila virilis
FBgn0210767
N
GK13168
Drosophila willistoni
FBgn0215177
N
GE10775
Drosophila yakuba
FBgn0228617
N
GB42921
Apis mellifera
GB42921
N
HMEL006186
Heliconius melpomene
HMEL006186
N
Hsal_02676--XP_625055.2_APIME
Harpegnathos saltator
Hsal_02676--XP_625055.2_APIME
N
ISCW005293
Ixodes scapularis
ISCW005293
N
L798_12146
Zootermopsis nevadensis
L798_12146
N
L898_g14011
Steinernema monticolum
L898_g14011
N
LCUP007789
Lucilia cuprina
LCUP007789
N
LDEC007066
Leptinotarsa decemlineata
LDEC007066
N
LLOJ004028
Lutzomyia longipalpis
LLOJ004028
N
LotgiG144192
Lottia gigantea
LotgiG144192
N
LotgiG176647
Lottia gigantea
LotgiG176647
N
MDOA008474
Musca domestica
MDOA008474
N
MESCA007902
Megaselia scalaris
MESCA007902
N
PHUM244090
Pediculus humanus
PHUM244090
N
PPAI002532
Phlebotomus papatasi
PPAI002532
N
PTRK_0001310900
Parastrongyloides trichosuri
PTRK_0001310900
N
RPRC014309
Rhodnius prolixus
RPRC014309
N
SINV16486
Solenopsis invicta
SINV16486
N
SPAL_0001274100
Strongyloides papillosus
SPAL_0001274100
N
SSTP_0000878000
Strongyloides stercoralis
SSTP_0000878000
N
SSTP_0001127200
Strongyloides stercoralis
SSTP_0001127200
N
SVE_0827400
Strongyloides venezuelensis
SVE_0827400
N
TC000618
Tribolium castaneum
TC000618
N
YQE_05481
Dendroctonus ponderosae
YQE_05481
N