CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LDEC007066
(
Leptinotarsa decemlineata
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
LDEC007066
T334889_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC007066-PA
Sox
327
390
NKVVTGYILYSREVRKQIVQNNPESTFGDISRIVGSEWKSLPQHEKQQWEEKASKLNEETKAML
Links
Other
Sox
family TFs
Other
Leptinotarsa decemlineata
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TC000618
Tribolium castaneum
TC000618
N
0.674
BGIBMGA010711
Bombyx mori
BGIBMGA010711
N
0.641
PPAI002532
Phlebotomus papatasi
PPAI002532
N
0.623
LLOJ004028
Lutzomyia longipalpis
LLOJ004028
N
0.619
polybromo
Drosophila melanogaster
FBgn0039227
N
0.616
GG12321
Drosophila erecta
FBgn0104611
N
0.616
GM22062
Drosophila sechellia
FBgn0176933
N
0.616
GE10775
Drosophila yakuba
FBgn0228617
N
0.616
AAEL000181
Aedes aegypti
AAEL000181
N
0.615
GK13168
Drosophila willistoni
FBgn0215177
N
0.605
LCUP007789
Lucilia cuprina
LCUP007789
N
0.605
MDOA008474
Musca domestica
MDOA008474
N
0.605
MESCA007902
Megaselia scalaris
MESCA007902
N
0.599
YQE_05481
Dendroctonus ponderosae
YQE_05481
N
0.594
CpipJ_CPIJ007271
Culex pipiens
CpipJ_CPIJ007271
N
0.588
CPIJ007271
Culex quinquefasciatus
CPIJ007271
N
0.588
HMEL006186
Heliconius melpomene
HMEL006186
N
0.588
GA10956
Drosophila pseudoobscura
FBgn0071012
N
0.581
GL13862
Drosophila persimilis
FBgn0151467
N
0.581
ADAC005840
Anopheles darlingi
ADAC005840
N
0.574
AMIN002364
Anopheles minimus
AMIN002364
N
0.574
ASTEI10740
Anopheles stephensi
ASTEI10740
N
0.574
AEPI009418
Anopheles epiroticus
AEPI009418
N
0.566
GI24041
Drosophila mojavensis
FBgn0146764
N
0.565
KGM_06850
Danaus plexippus
KGM_06850
N
0.563
GF23180
Drosophila ananassae
FBgn0100174
N
0.550
AGAP001099
Anopheles gambiae
AGAP001099
N
0.544
AALB009551
Anopheles albimanus
AALB009551
N
0.544
AARA006496
Anopheles arabiensis
AARA006496
N
0.544
ACHR006211
Anopheles christyi
ACHR006211
N
0.544
ACOM033657
Anopheles coluzzii
ACOM033657
N
0.544
AFUN001272
Anopheles funestus
AFUN001272
N
0.544
AMEC012325
Anopheles melas
AMEC012325
N
0.544
AQUA001810
Anopheles quadriannulatus
AQUA001810
N
0.544
AMAM022417
Anopheles maculatus
AMAM022417
N
0.543
GJ23670
Drosophila virilis
FBgn0210767
N
0.542
AFAF001135
Anopheles farauti
AFAF001135
N
0.542
ACUA025632
Anopheles culicifacies
ACUA025632
N
0.540
PHUM244090
Pediculus humanus
PHUM244090
N
0.530
ACEP25803
Atta cephalotes
ACEP25803
N
0.527
GB42921
Apis mellifera
GB42921
N
0.527
SINV16486
Solenopsis invicta
SINV16486
N
0.527
Cflo_01038--XP_625055.2_APIME
Camponotus floridanus
Cflo_01038--XP_625055.2_APIME
N
0.527
Hsal_02676--XP_625055.2_APIME
Harpegnathos saltator
Hsal_02676--XP_625055.2_APIME
N
0.527
AATE004647
Anopheles atroparvus
AATE004647
N
0.527
ASIS018375
Anopheles sinensis
ASIS018375
N
0.527
RPRC014309
Rhodnius prolixus
RPRC014309
N
0.519
ADIR010123
Anopheles dirus
ADIR010123
N
0.511
AMEM003228
Anopheles merus
AMEM003228
N
0.510
ISCW005293
Ixodes scapularis
ISCW005293
N
0.501
L798_12146
Zootermopsis nevadensis
L798_12146
N
0.492
PTRK_0001310900
Parastrongyloides trichosuri
PTRK_0001310900
N
0.490
SPAL_0001274100
Strongyloides papillosus
SPAL_0001274100
N
0.490
SSTP_0000878000
Strongyloides stercoralis
SSTP_0000878000
N
0.490
SVE_0827400
Strongyloides venezuelensis
SVE_0827400
N
0.490
DAPPUDRAFT_304382
Daphnia pulex
DAPPUDRAFT_304382
N
0.485
GH18462
Drosophila grimshawi
FBgn0125929
N
0.475
ISCW008318
Ixodes scapularis
ISCW008318
N
0.465
NEMVEDRAFT_v1g240009
Nematostella vectensis
NEMVEDRAFT_v1g240009
N
0.463
SMAR009610
Strigamia maritima
SMAR009610
N
0.461
L889_g13125
Steinernema feltiae
L889_g13125
N
0.454
CBN07735
Caenorhabditis brenneri
CBN07735
N
0.448
CBN31697
Caenorhabditis brenneri
CBN31697
N
0.448
CRE14258
Caenorhabditis remanei
CRE14258
N
0.448
pbrm-1
Caenorhabditis elegans
WBGene00007042
N
0.448
SMAR009325
Strigamia maritima
SMAR009325
N
0.447
MESCA011128
Megaselia scalaris
MESCA011128
N
0.443
SSTP_0001127200
Strongyloides stercoralis
SSTP_0001127200
N
0.442
ACYPI001480
Acyrthosiphon pisum
ACYPI001480
N
0.441
AMTR_s00023p00232620
Amborella trichopoda
AMTR_s00023p00232620
N
0.439
Minc06622
Meloidogyne incognita
Minc06622
N
0.438
MhA1_Contig232.frz3.gene23
Meloidogyne hapla
MhA1_Contig232.frz3.gene23
N
0.438
L898_g14011
Steinernema monticolum
L898_g14011
N
0.436
TOX2
Sorex araneus
ENSSARG00000001080
N
0.432
ENSTGUG00000014902
Taeniopygia guttata
ENSTGUG00000014902
N
0.432
tox2
Takifugu rubripes
ENSTRUG00000013848
N
0.432
LotgiG176647
Lottia gigantea
LotgiG176647
N
0.432
ENSMMUP00000034886
Macaca fascicularis
ENSMMUP00000034886
N
0.432
Hsal_06265--XP_624018.2_APIME
Harpegnathos saltator
Hsal_06265--XP_624018.2_APIME
N
0.432
RSKR_0000607700
Rhabditophanes kr3021
RSKR_0000607700
N
0.431
CGI_10018256
Crassostrea gigas
CGI_10018256
N
0.430
scaffold517-EXSNAP2012.7
Pristionchus exspectatus
scaffold517-EXSNAP2012.7
N
0.424
RSKR_0000620800
Rhabditophanes kr3021
RSKR_0000620800
N
0.423
CBG11867
Caenorhabditis briggsae
CBG11867
N
0.421
CJA03316
Caenorhabditis japonica
CJA03316
N
0.421
CJA30740
Caenorhabditis japonica
CJA30740
N
0.421