CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEMVEDRAFT_v1g240009
(
Nematostella vectensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
NEMVEDRAFT_v1g240009
T331484_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO46142
Sox
794
854
KKSLVTGYLLYCKQERSKIAEANPGLEFAKISMKVGEAWNSLPEDDKQVYRNKAKEIKAKQ
Links
Other
Sox
family TFs
Other
Nematostella vectensis
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MESCA011128
Megaselia scalaris
MESCA011128
N
0.515
LLOJ007360
Lutzomyia longipalpis
LLOJ007360
N
0.484
PPAI008460
Phlebotomus papatasi
PPAI008460
N
0.484
ACEP25803
Atta cephalotes
ACEP25803
N
0.477
GB42921
Apis mellifera
GB42921
N
0.477
SINV16486
Solenopsis invicta
SINV16486
N
0.477
Cflo_01038--XP_625055.2_APIME
Camponotus floridanus
Cflo_01038--XP_625055.2_APIME
N
0.477
Hsal_02676--XP_625055.2_APIME
Harpegnathos saltator
Hsal_02676--XP_625055.2_APIME
N
0.477
LDEC007066
Leptinotarsa decemlineata
LDEC007066
N
0.463
MESCA007902
Megaselia scalaris
MESCA007902
N
0.460
TC000618
Tribolium castaneum
TC000618
N
0.460
SMAR009610
Strigamia maritima
SMAR009610
N
0.455
RPRC003655
Rhodnius prolixus
RPRC003655
N
0.451
ISCW008318
Ixodes scapularis
ISCW008318
N
0.448
L798_00141
Zootermopsis nevadensis
L798_00141
N
0.444
LLOJ004028
Lutzomyia longipalpis
LLOJ004028
N
0.436
PPAI002532
Phlebotomus papatasi
PPAI002532
N
0.436
LCUP007789
Lucilia cuprina
LCUP007789
N
0.428
MDOA008474
Musca domestica
MDOA008474
N
0.428
GI24041
Drosophila mojavensis
FBgn0146764
N
0.423
GK13168
Drosophila willistoni
FBgn0215177
N
0.423
AAEL000181
Aedes aegypti
AAEL000181
N
0.420
ISCW005293
Ixodes scapularis
ISCW005293
N
0.418
Ocbimv22010533m.g
Octopus bimaculoides
Ocbimv22010533m.g
N
0.418
HMEL006186
Heliconius melpomene
HMEL006186
N
0.416