CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAR009610
(
Strigamia maritima
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SMAR009610
T332631_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMAR009610-PA
Sox
355
417
KGRPMTAYTLWCRDHRPWIVAENPDMDFAGISRRLGEVWQALPDKEKLFWRRQAKRLSAKTLV
Links
Other
Sox
family TFs
Other
Strigamia maritima
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ISCW008318
Ixodes scapularis
ISCW008318
N
0.610
CapteG128587
Capitella teleta
CapteG128587
N
0.562
Ocbimv22010533m.g
Octopus bimaculoides
Ocbimv22010533m.g
N
0.559
CpipJ_CPIJ016883
Culex pipiens
CpipJ_CPIJ016883
N
0.527
CPIJ016883
Culex quinquefasciatus
CPIJ016883
N
0.527
LLOJ007360
Lutzomyia longipalpis
LLOJ007360
N
0.524
PPAI008460
Phlebotomus papatasi
PPAI008460
N
0.524
Lus10023090.g
Linum usitatissimum
Lus10023090.g
N
0.523
L798_00141
Zootermopsis nevadensis
L798_00141
N
0.522
MESCA011128
Megaselia scalaris
MESCA011128
N
0.515
ACEP17003
Atta cephalotes
ACEP17003
N
0.498
GB41882
Apis mellifera
GB41882
N
0.498
Cflo_06221--XP_392763.2_APIME
Camponotus floridanus
Cflo_06221--XP_392763.2_APIME
N
0.498
Hsal_08739--XP_392763.2_APIME
Harpegnathos saltator
Hsal_08739--XP_392763.2_APIME
N
0.498
NV16860
Nasonia vitripennis
NV16860
N
0.496
ISCW005293
Ixodes scapularis
ISCW005293
N
0.491
CGI_10027966
Crassostrea gigas
CGI_10027966
N
0.489
TC000618
Tribolium castaneum
TC000618
N
0.471
RPRC003655
Rhodnius prolixus
RPRC003655
N
0.467
Sakowv30022291m.g
Saccoglossus kowalevskii
Sakowv30022291m.g
N
0.466
SPU_000793
Strongylocentrotus purpuratus
SPU_000793
N
0.461
LDEC007066
Leptinotarsa decemlineata
LDEC007066
N
0.461
NEMVEDRAFT_v1g240009
Nematostella vectensis
NEMVEDRAFT_v1g240009
N
0.455
NV11063
Nasonia vitripennis
NV11063
N
0.453
Sakowv30021656m.g
Saccoglossus kowalevskii
Sakowv30021656m.g
N
0.444
MESCA007902
Megaselia scalaris
MESCA007902
N
0.443
CLEC008450
Cimex lectularius
CLEC008450
N
0.429
SMAR009325
Strigamia maritima
SMAR009325
N
0.422
DAPPUDRAFT_236433
Daphnia pulex
DAPPUDRAFT_236433
N
0.421
TMUE_s0089001400
Trichuris muris
TMUE_s0089001400
N
0.418